Anoplopoma fimbria (sablefish): 129109135
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Entry
129109135 CDS
T09102
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129109135 (ascc3)
Enzymes [BR:
afb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129109135 (ascc3)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
129109135 (ascc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
129109135
NCBI-ProteinID:
XP_054477098
LinkDB
All DBs
Position
20
Genome browser
AA seq
2194 aa
AA seq
DB search
MSPPRLTGALRSFSNVSKKEDITEQLYDLKTKRLKRRELFAREGLTWQKIFHFCSEHQDK
AKQQAASQELKSLLLAAKEIVGTEHGQAAIESAAVFLFETFHNKDHVGTEETRAIKQMFG
PFPSSAAEASCACVARLVAPLGDSRVENFIQTLSSRHNPQRGSAFGRNIAFSHDCYALDP
LEDLPCSGIHEENTGLDFINFLNNQQSGRKSAGEEEGSSSGRALNSGDGAILRTEVEKYL
DGGNMISSSPEELCTSLFEMLASHKSDDELQNELFELLGPEGLEMISILLQRRAAIVDSL
LAIPSDRTSYPPDMSRLVGGEVTKPTYGCQVTIQSEQEKQMMKMYRREEKRERKKGKGID
DSDFSEAVLTFDPKEMRTQREQALLTARRDPILSRERVYERIRYPNVYDSYAEAAKMPAF
VGGARMMLPEGIRRDNTKMFEEVEIPPNQPMPIGFEEKPIYISELDEIAQLVFKGMKRLN
RIQSLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIHQHLQPGGVIKKDEFKIIYVA
PMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLDV
ASFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQLHDMEEVCYNKVLEQVKAGHQ
VMVFVHARNATVRTGMGLIEMAKNHGETCFFQPDQGPDYGQCEKQIQRSRNKQMKEMFPE
GFGIHHAGMLRSDRSLMESMFSKGHLKVLICTATLAWGVNLPAHAVIIKGTQIYDAKRGA
LVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFLDSLADN
LNAEIALGTVTNVEEAVKWLSYTYLYVRMRANPLAYGINHKAYQMDPSLELYRKELVVES
GRKLDKARMIRFEERTGYYASTDMGRTASHFYIRYNTIETFNELFNSQRTEADILSIVSK
AEEFDQLKVRDEEMEELEQLLCNYCELPAAGGVENGYGKINVLLQTYISRGEVDSFSLIS
DLSYVAQNAARIVRALFEIALRKRWPAMTYRLLSLCKMIDKRLWGFAHPLRQFPNLSHVV
LNRLEEKKLTVDKLKEMRKDEIGHMLHHVNIGLTVKQCVHQIPSITMEANIQPITRTVLR
VRLIVTPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEHFLLQKKQVVTEEPQHIVFTI
PIFEPLPSQYYIKAVSDRWLGAEAVCIINFQNLILPERHPPHTELLDLQPLPVTALGNRE
YESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAMFRVFNKYPNAKVVY
IAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAQADLIVTTPEKWDGVSRS
WQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKTVRVVGLSTALANAR
DLADWLGIGQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPAKP
VLIFVSSRRQTRLTALDLIAFLATEDNPKQWLHQDEREIEAIIATVRDSNLKLTLAFGIG
MHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYFDGKTRRYVD
YPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLTVLSDHLNA
EIAAGTISSKQDAMDYITWTYFFRRLVMNPSYYSLEDISHETINKYLSNLVAKSLRDLEC
SYCIEIKEDDQTIEPLTYGRIASYYYLRHQTIGTFKERLKAELPIHELLSVLTEAEEYAE
LPVRHNEDQLNSQLAQQLPLKVNPHSYDSAHTKTHLLLQAHFSHASLPCSDYTTDTKTVL
DNTIRICQAMLDVAANEGWLVTAISIINLVQMIIQGRWLHDSSLLTLPHVEQQHLYLFRK
WANRKGRSNSPIEGLPELIAACDGKESVFAAIVGEEFQSSQIAQAWSFLSHLPVLEVSMS
VKGWWEQSQQQTERRLPAAGAKVKEGSSWLDVHADQEYVLQVSLRRINLGQQRRKQDSKA
QASRFPKAKDEGWFLVMGEVDRRELLAVKRVGYVRHHTAVSVAFYTPERTGKCIYTLYLM
SDSYLGLDQQYDIHLNVTPASITAQVNTEVSDSQ
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcctcggctcacaggtgctctgcgctccttctccaatgtcagcaagaaggag
gacatcactgaacagctctatgatctgaagaccaagcgactaaagagacgggagctgttt
gccagagagggtctgacgtggcagaagattttccatttctgctctgagcatcaagacaaa
gctaaacagcaagctgccagtcaggaactgaagagcctccttctggcagccaaggaaatt
gtggggactgaacatggtcaggcagccattgaaagtgctgctgtctttctgtttgagacc
ttccacaacaaagaccatgtgggcacagaggagacccgggccatcaagcagatgttcggc
ccctttccgtcatctgcagccgaagcctcctgtgcctgcgtggctcggctggtggctcca
ctcggagactcccgagttgagaacttcatccagaccctgagctcccgtcacaacccccaa
cggggctccgcttttggacgcaacattgccttctcgcatgactgctacgcactggatcct
ctggaggacctgccctgctccggcatccatgaggagaacacgggtctagacttcatcaac
ttcctcaacaaccagcagagtgggagaaagagcgccggtgaggaagaggggtccagctca
ggaagagctctgaactctggtgatggagccatccttagaacagaggtggagaagtatttg
gacggaggcaacatgatctcctccagcccagaggagctgtgcacctccctgtttgaaatg
ctggcctcccacaagagcgacgatgagctgcagaacgagctgttcgagctgctgggccca
gaggggctggagatgatctccatcctgctccagcgaagggcggccatcgtggactccctc
ctcgccatcccatctgacaggaccagctacccaccagatatgagccgattagtcggtggc
gaagtgaccaagcccacctatgggtgccaggtgaccatccagtcggagcaggagaaacag
atgatgaagatgtaccgcagggaggagaagagagagaggaagaaaggcaaaggaatagat
gacagcgacttctcagaggctgtcctgaccttcgaccccaaagagatgagaacccagcgg
gagcaggccctgctgactgctcgaagggatcccatactgagcagagaaagagtgtatgaa
cgtattcggtatcccaatgtttatgacagctacgcggaggccgcaaagatgcctgcgttt
gttggaggagccaggatgatgctccccgagggaatacgcagagacaacactaagatgttt
gaggaggtggagatcccacccaaccaacccatgcccatcggctttgaagagaagcccatc
tacatctctgaactggatgagatcgctcagctggtgttcaaggggatgaagcgtctgaac
aggatccagtccctggtctttgagacggcctacaacaccaacgaaaaccttctcatttgc
gctccaactggtgccggtaagaccaacattgccatgctgacggtccttcatgagatccac
cagcacctgcagccggggggcgtcatcaagaaggatgaattcaagatcatatatgtggct
cctatgaaggccttggcagctgagatgactaattacttcagtaagcgattggagccactg
ggcatcgctgttaaagaactcactggagacatgcagctaaccaaaggagagatcctacga
acacagatgttggtgacgactccagagaagtgggatgtcgtgaccaggaagagtgttgga
gatgtggctctctcccagattgtgcgtctcctaatcttggatgaagttcatctcctccat
gaagaccgaggaccagtactggagagcctggtggcccggaccatcagacaggtggaatcc
acccagagtatgatcaggatcctgggactatcagccaccctgcccaactacctggatgtg
gcctccttcctgcacgtcaacccctacattggcctctttttctttgacagtcgcttcaga
ccggtgccccttggacagacctttgttggcatcaaatccactaacaagatccagcagctt
catgacatggaggaggtgtgttacaacaaagttctggagcaggttaaagccggccatcag
gtgatggtgtttgtccacgctcgtaatgccacagtgaggacgggcatggggctgatcgag
atggcaaagaaccatggagaaacatgcttctttcaaccagaccagggtccagactacggc
cagtgtgagaaacagatccagcgctccagaaacaagcaaatgaaggagatgttcccagaa
ggctttgggatccatcatgctggcatgctgcggtctgaccgcagcctgatggagagcatg
ttctctaagggccacctcaaggtgctgatctgtactgccactctggcctggggagtgaac
ctgccggcccatgcagtcatcatcaagggcactcagatctacgatgcaaagcgtggtgcc
ctggtggatctgggcatcctggacgtcatgcagattttcgggcgtgcgggacgcccccag
tttgacaagtacggcgagggcaccatcattaccacccacgaaaagctgagccactacttg
accctgctcacccagcagaaccccatcgagagtcagttcctggacagcctggccgacaac
ctcaacgccgagattgctctggggacagtcaccaacgtggaggaggcagtgaagtggctc
agttatacttacctctatgtccgcatgagggccaacccactggcttacggcatcaaccac
aaggcttatcagatggatccttccttggagctgtacaggaaggagcttgtggtggagtca
ggcagaaagctggataaggccaggatgatccgcttcgaagagcgcactggctactatgcc
tccaccgacatgggcaggaccgccagccacttctacatcagatacaacaccatagagact
ttcaatgaacttttcaactctcagaggacagaagctgacatcctcagtattgtctccaag
gccgaagagtttgatcagcttaaggtccgtgatgaggagatggaggagctggaacagttg
ctgtgtaactactgtgagctgccggctgcaggtggggtggagaatggctatggcaagatc
aacgttctgcttcagacgtacatcagccgaggagaggtggacagcttctccctcatctca
gacctgtcatacgtggcacagaatgctgctcggatcgtcagggctttgtttgagattgcc
ctgaggaagcggtggccggctatgacctaccgactgctgagcctctgtaagatgatagat
aagcggctgtggggctttgcccaccctctccgccagttccccaacctgagccatgttgtg
ctgaaccgcttggaggagaagaagctcactgtggacaaactgaaggaaatgaggaaggat
gagattggtcacatgctgcaccatgtcaacatcggcctaacagtcaaacagtgtgtccac
cagatcccctccatcacaatggaggccaacattcagccaatcacacgcaccgtcctacgg
gttcgactcattgtcacgcctgactttcgctggaatgatcaggtccacggctcggtgggt
gagccctggtggttgtgggtggaggatcccatcaatgatcacatctaccactctgagcac
ttcctcctgcagaagaaacaggtggtaacagaagagcctcagcacatagtgttcaccatc
cccatctttgagccgctgccctcccagtactacatcaaggcggtgtctgaccgctggctc
ggggccgaggccgtctgcatcattaacttccagaacctcatcttacccgagagacaccct
ccacacactgagctgctggacctgcagccgctgccggtgacggctctaggaaatcgggag
tacgagagcttgtacaagttcacccacttcaaccccatccagactcagatcttccacacg
ctgtatcacaccgacaccaacgtcctgctgggggcgccaacgggctctggaaaaaccatt
gcagcagagatggccatgttccgtgtcttcaacaagtatccaaatgctaaggtggtgtat
atcgccccactgaaggccctggtcagagagaggattgaggactggaagatcaggattgag
gagaaactggggaagaaagtggtggagctgacgggtgacgtgactccagacatgagagct
atagcacaggccgacctcatcgtcaccacaccagagaagtgggacggagtaagccgaagc
tggcagaacaggagctacgtccagaaagtagccattctcatcatcgatgagatccacctg
ctgggtgaggacagaggtccagtgttggaggtcatcgtgtcccgaaccaacttcatctcc
tctcacacatctaagaccgtccgagtagtcggcctgtccacagctctggccaatgctcga
gacctcgctgactggctgggaatcggacaggtgggtttgtttaacttccgtccgtctgtt
cgccccgtaccgcttgaagttcacatccatggtttcccagggcaacactactgcccccgc
atggccagcatgaacaagcctaccttccaagcgatacgtagccactccccagccaagccg
gtgctgatttttgtctcatcccgacgccaaactcgactgactgctctggacctcatcgcc
ttcctggccacagaagacaaccccaagcagtggctgcaccaggacgagagagagatagag
gccattatcgccacagtacgggactccaacctgaagctaacgctggcctttgggatcggc
atgcatcacgcaggcctccatgagagggacaggaagactgtggaggagctgtttgtcaac
tgtaagatccaggttctgattgccaccagtactttggcttggggggtgaacttccctgct
cacctggttgtcgttaagggaactgaatactttgatggcaaaaccaggcgctacgtggac
taccccattacagatgttctgcagatgatggggcgagcaggacggcctcagtttgatgac
cagggcaaagccgttatcctagtccatgacatcaagaaggatttctacaagaagttcctc
tatgagcctttccccgtcgagtccagcctcctcactgtgctgtcagaccatctgaatgct
gagatagctgcaggaaccatctcatccaaacaggatgcaatggactacatcacctggacc
tacttcttcaggcggctggtgatgaaccccagttactacagcctagaagacatcagccac
gagaccattaacaaatacctgtccaacctggtggcgaaaagcctgcgggacctggagtgc
tcttactgcatagagataaaggaggacgatcagaccattgagccactgacttacggtcgc
atcgcctcctattactacttgaggcatcagaccatcggcacgtttaaagagcgactgaag
gcggagctgcccatccacgagctgctctccgttttgacggaagcagaggagtatgccgag
ctgcccgtcagacacaatgaggaccagctgaacagccagctggctcagcagctccccctg
aaagtcaacccccactcctacgacagtgcccacaccaagacccatcttctgctccaggcc
cacttcagccacgcctcgctgccgtgcagcgactacaccaccgataccaagacggtactg
gacaacaccatccggatctgtcaggcaatgctggatgtcgctgccaacgaaggctggctc
gtcacagccatcagcatcatcaacctggtgcagatgatcatccagggtcgctggctgcac
gactcctcattactgacgctgccacatgttgaacaacaacacctctatctgttcagaaaa
tgggcaaacaggaaggggcggagcaactcgccaatcgaaggacttcctgagctgattgct
gcctgcgacggaaaggagagtgttttcgctgctatcgtcggtgaagagttccaatccagt
cagatcgcccaggcctggtccttcctgagtcacctcccagtgctggaggtatccatgagc
gtgaagggctggtgggagcagagccagcagcagacggagcgtcggctgccggcagcagga
gctaaggtgaaggaggggagcagctggctggatgtccacgccgaccaggagtatgtcctg
caggtgtctctgagacgcatcaacctgggccagcagaggaggaagcaggacagtaaggcc
caggcttccaggttccccaaggcgaaggatgaaggctggttcctggtcatgggagaggtg
gatcgcagggagctgctggctgtcaaacgggtcggatacgtgcgccaccacacggccgtg
tccgtggccttctacacgccagagaggactggaaagtgtatctacacactgtacctgatg
agtgacagctatctgggtctggaccagcagtatgacatccacctgaatgtaacgccggcc
agcatcacggctcaggtcaacacagaggtgtccgacagtcagtga
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integrated database retrieval system
