Anoplopoma fimbria (sablefish): 129109152
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Entry
129109152 CDS
T09102
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04010
MAPK signaling pathway
afb04020
Calcium signaling pathway
afb04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129109152 (ntrk1)
04020 Calcium signaling pathway
129109152 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129109152 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129109152 (ntrk1)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129109152 (ntrk1)
Protein kinases [BR:
afb01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
129109152 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
Ig_2
LRR_8
ig
C2-set_2
TrkA_TMD
LRR_5
Haspin_kinase
Atypical_Card
CFC
Motif
Other DBs
NCBI-GeneID:
129109152
NCBI-ProteinID:
XP_054477125
LinkDB
All DBs
Position
20:22842540..22887408
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AA seq
810 aa
AA seq
DB search
MAVAPRALALGLPLVLALLSVAPAPTLGGCPAACRCSFAMLQCLEPNGIASIPALAPQES
ENVTEIYIENQAALENITEIDLVYYRELKNLTVTSCKLRLISATAFKHNLKLQYVNLASN
SLEHISWKVFHFLPQLNLVLRDNPLVCSCDLHWLQQWQQNDRGDVDNQMLSCFSDDQEEP
LNSLVLDNCSLPQVTIVSFKDPKIQEGGNLTFACQVTGSPTPTVRWRTDELQSNFLTQDR
IWGSTLELVLFLTNVSSSDNLHNLTCEAENQAGPREEVVQLDIEFPVRIIYLKDAVQQHH
WCFPFVVDGNPEPTITWRYNGKELNESAYRYTQLIPDSGDGSVKHGCLFLNKPTHINNGR
YTLIVQNKLGRDEATANGMFMDNPFDPQDPEGIFPVPDPNPTPTNKSIMNITENPESRMF
VNLSLFEQVSVAVGLALFACTFLLIMVLVINKCGQNSKFGIHRSSVLGTEDELAVSLRFM
NFGTSPPSSDEDSGLSSFVENPQYFCGIIKEKDMCVQHIKRQDIVLKWELGEGAFGKVYL
ADCANLSPDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQHIVRFYGVCTDGEPLA
MVFEYMRHGDLNRFLRAHGPDARILEETKMPPLGQLTLPQMLHIAAQIASGMVYLASLHF
VHRDLATRNCLVGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTT
ESDIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHLLMQGCWQR
EPQQRMVIKDIHSRLLALVKNPPVYLDILG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcaccgcgggccctggcgctcggcttgcccctggtgctcgccctgctcagc
gtggcgccggcgcccaccttgggaggctgcccggcggcttgccggtgctctttcgccatg
cttcagtgcctggagcccaatggcatcgccagcatcccggcactggccccgcaagagagc
gagaacgtgacagagatttacatagaaaaccaagcagccctggagaatataacagaaatt
gatcttgtctactacagagagctgaagaacctcacggtcacatcgtgtaagctgaggctc
atctctgccactgccttcaagcacaacctcaagctccagtatgtgaacctggcatcaaac
tctctggaacacatctcctggaaggtgtttcattttctgccacagctcaacctggttctg
agggacaaccctctcgtctgctcctgtgacctccactggctccagcagtggcagcagaat
gaccgcggtgacgtggacaaccaaatgttgtcttgtttctccgatgatcaagaagaaccg
ctcaactctttggtactagataactgcagtctgcctcaggtgaccattgtctccttcaaa
gatccaaagattcaagaaggaggcaacctgacatttgcttgtcaagtgacaggaagtccg
actcccactgtgagatggcgaactgatgagctccaatccaacttcttaacccaggacaga
atctggggctccacattagagctggtccttttcctcaccaacgtctcatccagcgacaac
ctgcacaacctaacctgtgaggccgagaaccaagctgggcccagggaggaggtggtgcaa
ttggacatcgagtttccagtcagaatcatctacctgaaggacgccgtgcagcagcaccac
tggtgtttccccttcgttgtggacggcaaccctgaaccaaccatcacctggcgctacaat
ggcaaagagctcaacgagagcgcctacagatacacccagctcatccccgactcgggtgac
ggatcggtgaaacacggatgtctcttcctcaacaagcccacccacatcaacaacggccgc
tacactctgatcgtgcagaacaaactgggaagagatgaggccacggccaacgggatgttt
atggacaacccgttcgacccacaggatccagaggggatatttccagtccctgatccgaac
ccaactcctacaaacaaatcaatcatgaacatcacagagaacccggagagtcgaatgttt
gtgaatctgtctttgtttgaacaggtgtctgtggctgtgggtcttgctctgtttgcctgc
actttcctcctcatcatggttctggttataaacaagtgtggccagaattccaagtttggt
attcaccggtcatcagttttgggaactgaggatgaactggctgtttcgcttcgtttcatg
aacttcggaaccagcccgccttcctcagatgaagactctggtttatccagcttcgtagag
aatcctcaatacttctgcggcatcatcaaggagaaagacatgtgtgtccagcatattaaa
cggcaggacattgtgttgaagtgggagctgggtgaaggagcgtttggaaaagtctacctg
gcagattgtgccaacctcagccccgacagcgacaagatgctggtcgccatcaagactcta
aaagatgccaacgagtccacccggcaggacttccagagggaggcggagctgctgacggtg
ctccaacaccagcacattgtgcgtttctacggcgtctgtacggacggagagcctctggcc
atggtgtttgaatacatgaggcacggagacctcaacagatttctcagagctcacggcccc
gacgctcgtatcctggaggagacgaagatgcccccgctgggtcagctgactctgcctcag
atgctgcacatcgccgcccagatcgcctcaggcatggtctacctggcatcgctgcacttt
gtgcaccgcgacctggcaacccgcaactgtctggtgggggagggcctggtggtcaaaatc
ggagactttggcatgtcccgagacatctacagcacggattactatcgggtgggcggacgt
acgatgctgccgatccgctggatgcccccggagagcatcatgtacaggaagttcaccacg
gagagcgacatctggagcttcggcgtggtcctctgggagatcttcacctacggcaaacag
ccctggtaccagctgtccaacagtgaggccatcgaatgcatcacgcagggaagggaactg
gaaaggccacgcacctgcccgaaggaggtgcacctgctgatgcagggctgctggcagagg
gagccccagcagaggatggtcatcaaggacatccacagccgcctgctggccctggtcaag
aacccgcccgtctacctggatatcctgggctaa
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