Anoplopoma fimbria (sablefish): 129109160
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Entry
129109160 CDS
T09102
Symbol
chrnb2
Name
(RefSeq) LOW QUALITY PROTEIN: neuronal acetylcholine receptor subunit beta-2
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129109160 (chrnb2)
04082 Neuroactive ligand signaling
129109160 (chrnb2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129109160 (chrnb2)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
129109160 (chrnb2)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
Motif
Other DBs
NCBI-GeneID:
129109160
NCBI-ProteinID:
XP_054477135
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Position
20:15845688..15863725
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AA seq
546 aa
AA seq
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MMMDGWPSLMLLAVLAIAGGGLGADTEERLVEHLLNPAHYNKLIRPATNGSELVTVQLMV
SLAQLISVHEREQVMTTNVWLTQEWQDYRLTWVPEEFDGMLKVRLPSKHIWLPDVVLYNN
ADGVYEVSFYSNAVVSYDGSIFWLPPAIYKSACKIEVKHFPFDQQNCTLRFRSWTYDRTE
IDLVLRADVASMDDFTPSGEWDIIALPGRRNENPADPTYVDITYDFIIRRKPLFYTINLI
IPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLDVPLVGKYLM
FTMVLVTFSIVTSVCVLNVHHRSPTTHTMXPWVKLVFLNKLPALLFMRQPRNSCERQRLR
QRRRAQEQKEGGRSGEAGALVVGLGLGNAGGNGGGTSTGVFSKEDNDPCTCYVNRASVKQ
FGGDLGGAGGGSMDGLNRVREGREGASGNLPRGKQAAGGPALTQALLAQACPGFEEAVEG
VRFIANHMKSEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTLGMFMQPLFQNYTVKT
ITSSPG
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggacggctggccgtcgctgatgctgctggctgtcctcgccattgcgggaggc
ggcctcggggcagacacagaggagcggttggtggagcatctcttaaaccctgcccactac
aacaaactgatccgtcccgcgactaacggctccgagctggttaccgtgcagctgatggtg
tcgctggctcagctcatcagcgtgcatgaaagagagcaggtgatgaccaccaatgtctgg
ctgacacaggagtggcaggactatcggctgacttgggtccctgaggagtttgatgggatg
ttgaaggtcaggctgccctcaaaacacatctggctgccggacgtggtgctctacaacaat
gctgatggggtgtacgaggtgtcattctactccaacgcggtggtttcctacgacggcagt
atcttctggttgcccccggccatctacaagtcagcctgcaagatcgaggtaaagcacttc
cccttcgaccagcagaactgcacgctgcgcttccgctcctggacctatgaccgcacagag
atcgatctggttctccgtgctgacgtggccagcatggacgacttcacgcccagcggcgag
tgggacatcatcgccctgcccggcagacgaaacgagaacccagccgaccccacctatgtg
gacatcacctacgacttcatcattcgcaggaagccgcttttttacaccatcaacctcatc
atcccgtgtgtgctcatcacctcgctggccatcctggtcttctacctgccctctgactgc
ggagagaagatgacgctctgcatctccgtgctgctggctctcactgtgttcctgctgctg
atctctaagatcgtcccccccacgtcactagacgtccccctcgtggggaagtacctgatg
ttcactatggtcctggtcactttctccatcgtcaccagtgtgtgtgtgctcaacgtacac
caccgctcgccgaccacacacaccatgnccccctgggttaagctggtgttcctcaacaag
cttcccgccttgctcttcatgcggcagcccaggaacagctgcgagcgccagcggctgcgc
cagagaaggagggcccaggagcagaaggagggtgggcgcagcggggaggcgggggccctg
gtggtggggctcgggttgggcaacgctggcgggaacggagggggaacctccacaggggtg
ttcagcaaggaggacaatgacccttgtacctgctacgtgaatcgggcgtctgttaaacag
ttcggaggggatctgggaggagctggtgggggatccatggatggtctgaacagggtgagg
gagggccgggaaggggcctctggaaacctgccacgggggaagcaagcagcgggaggtccc
gctctgactcaggccctgctggctcaagcctgtccgggctttgaggaggctgtggaagga
gttcgcttcatcgccaaccacatgaagagtgaggatgatgatcagagtgtgagcgaggac
tggaagtacgtcgccatggtgatcgaccgcctcttcctgtggatctttgtgtttgtgtgc
gtgtttggcacactgggcatgttcatgcagccgcttttccagaattacacagtcaagacc
atcaccagctcgccgggctga
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