Anoplopoma fimbria (sablefish): 129109215
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Entry
129109215 CDS
T09102
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3
KO
K03145
transcription elongation factor S-II
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129109215 (tcea3)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
129109215 (tcea3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
129109215
NCBI-ProteinID:
XP_054477211
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All DBs
Position
20:complement(2655613..2664630)
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AA seq
720 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSGNNTEGAMDLLKELKSFNLTLKLLQETRIGMSVNGIRKHST
DEEVIALAKLLIKDWKRLLDSEKPADMKNGLDSSKTAVSPSSSPSETQSSHKRLDVKPKH
DSDPDKKHPDKNGKEKHNAEHKKRHADDPSDEKNLEEPQKEEYHQKIRKEKHLEEPKKQG
YAEDTLPVMDNKKQKHMQDLQSERHKPEQKQERSLGEPKKRRMEAVKKKKHPEEPKRHSY
TDDIRKDKLREENRHERPIHSPQWERLPSEPQRENPAVHKPIFESMLSWHLFRKDSKDSS
SRHPGPHAPQPTSQPAKRPSLEVKKERKVPPDPNAPIAPLPLHLHPPPPRKEPPDPNAPL
PPLALHLHPPPPPLKRPSLDGKKESRKELSDSKPPPQKKTSDPVKRDRKDSSDSKGPKRH
SDEAKRERKDSSDAKPPLLKKPSLDVKKEKHRKDSCDSKPGQTVKRQLSDTKPDRRESID
LKKSSSPPAKKLTAERRESHGLKTSLPGPPQRKPSADSIERKSKIDTPKSPTTPTSPMSP
SFSSAGGPLPPHISTGDSVRDKCIDLLAAALRTDNDYKDFGTNCDSMAAEIEDHIYQETK
ATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIDLSRIASMSSEEMASDELKQLRNVLT
QEAIREHQMAKTGGTTTDLLQCGKCRKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgagaagaagatctcattcggattgcaaaaaaacttgacaagatggtgtctgga
aataacacggagggtgccatggacctgctgaaggaactgaaaagtttcaatttgactctc
aaacttctccaggaaacacgaattggcatgtctgtgaacggtatcaggaagcactccacg
gacgaggaagttatagccttggcaaagctcctcattaaagactggaaaagacttctggac
tctgagaaaccagctgatatgaaaaacggtttggactccagcaaaacagccgtgtctcca
agcagctccccctctgagacacagagcagtcacaaaaggcttgatgtcaaacccaaacac
gactcagatcctgacaagaaacaccccgacaaaaacggaaaagaaaaacataatgccgaa
cacaaaaagagacatgcagatgaccccagtgatgaaaagaacctggaggagccccaaaag
gaggaatatcaccaaaaaatcagaaaagagaagcatttagaggaacccaaaaaacaagga
tatgcagaggatactcttcctgttatggataacaaaaaacagaagcacatgcaagacctg
cagagtgagagacacaagccggaacaaaagcaggaaaggtcattaggagaaccaaagaag
agacgcatggaagcagtcaaaaagaaaaaacaccctgaagagccaaagaggcacagctac
acagacgacattagaaaggacaaactcagagaagaaaaccgacatgagaggccgatacac
tcaccccaatgggagagactgccgagtgagccccagagagagaaccccgctgttcacaaa
ccaatatttgaaagtatgctctcgtggcatttgttcaggaaggacagtaaagactcttca
tcccgacatcctggtcctcatgctcctcaacccacctctcagccggctaagcgaccttcg
ctggaagtaaagaaagagaggaaagttccaccggacccaaatgctccaattgctcctctt
cctcttcaccttcatcctcctccacccagaaaagagcctcctgaccccaacgctcctctt
ccaccacttgctcttcaccttcaccccccaccacctcccctgaagcgtccctcactggac
gggaaaaaggagagcaggaaggagttgtcagactctaaacctcctccacagaagaagacg
tcagatcccgtgaagagagacaggaaagactcatcggatagcaaagggcctaaaagacac
tcggatgaagccaagagagaaaggaaagattcatctgacgctaaaccgccacttctcaaa
aagcccagtttggatgtcaaaaaagagaaacacaggaaggactcctgcgactccaagcct
ggccagactgtgaaacgtcaactgtctgacaccaaacctgacagacgcgaatccattgat
ttaaagaaaagcagctcaccaccagcaaagaagctaacagctgaaagacgagagtctcac
ggcttgaagacttctctgcctggacctccacagaggaagccctctgctgacagcattgaa
aggaagagcaaaatcgatacccctaaaagtcccaccaccccgaccagcccgatgtcaccc
agcttcagttctgcggggggtccactgcctcctcacatctctaccggagactccgtcaga
gacaagtgcattgacctgttggcagctgccctgcgcacagacaacgactacaaggatttt
ggaacaaactgtgacagcatggctgcagagattgaagatcatatctaccaggagacaaag
gccacagatatgaaatataaaaacagagtacgcagccgcatcagcaacctgaaggacccg
aagaaccctgggcttcgcagaaacgtccttgctggaagcattgacctgagccgcatcgcc
agcatgtcttctgaggagatggccagcgatgagctgaaacagctgaggaacgttctcacc
caggaggccataagggagcaccaaatggccaaaactggtggcaccaccaccgacctgctg
cagtgcggcaaatgcaggaagaagaactgcacttacaaccaggtgcagacacgcagtgct
gatgagccaatgaccacatttgttctgtgcaatgagtgtggtaaccgctggaagttctgc
tga
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