Anoplopoma fimbria (sablefish): 129109232
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Entry
129109232 CDS
T09102
Symbol
shc1
Name
(RefSeq) LOW QUALITY PROTEIN: SHC-transforming protein 1
KO
K06279
SHC-transforming protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04012
ErbB signaling pathway
afb04510
Focal adhesion
afb04910
Insulin signaling pathway
afb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
129109232 (shc1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129109232 (shc1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
129109232 (shc1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
129109232 (shc1)
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Gene cluster
GFIT
Motif
Pfam:
PID
SH2
PGM_PMM_IV
DUF7063
DUF7461
Motif
Other DBs
NCBI-GeneID:
129109232
NCBI-ProteinID:
XP_054477229
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Position
20:complement(15893148..15903564)
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AA seq
605 aa
AA seq
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MELVPKTKYTHFRSESLSSTDETNSNPSSFPPSSPATPLTPSPGLPSSLSSSSLTPILPP
XSPRPAENSPTTLCSFFPRMGSLRLGVSATLLPGLKASSRPQQPHAPAEFSGDDRSNSSS
SPPLHHTLPPLTAPSPPPRPPLQDMNRLGGASRKARAEGAARKARVEGAQLGGDEWTRHG
SFVNKPTCGWLHSDSVVSTTGVSYSVRYMGCVEVLQSMRALDFNTRTQVTREAISVVCEA
VPGAKGAQRRRKPSSRCMTSILGKSNLQFAGMTISLTISTSSLNLLAADCKQIIANHHMQ
SISFASGGDPDTAEYVAYVAKDPVNQRACHILECSEGLAQEVISTIGQAFELRFKQYLKN
PPKLVTPHDRMAPFDGSAWEEEDDEAAPPPDVPYYNNFPGKQPPPGGLIDMRTRPGATLP
YGQPGQNDIHKQPLPPLPVGAKEGGREMFDDPSYVNVDKPRLPVAANGNAHRDAFDMKPF
DDALGVSGQGGQNSVTTAPPLVQQLQGEAWFHGSLSRREAERLLTRDGDFLVRESGTTPG
QYVLTGQQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNRLPIVSAGSEVCLQQP
VERRA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggagcttgtcccaaaaaccaagtacacccactttcggagtgaatcgctgagctcaacc
gatgaaacaaactccaatccatcatcgttccctccgtccagtccagccaccccgctcact
ccctcccctggtctgccttcttctctctcctcctcgtctctcactcctatcttgccccct
ncttctccccgcccggccgagaacagccccaccaccctctgctcgttcttccccaggatg
ggatcccttcgcctcggagtctctgcgacccttctcccaggactcaaggcctcgagcagg
ccgcagcagcctcacgctcctgccgagttctctggggacgaccggagcaactccagctcc
tcccctccgcttcatcacacacttccccctttaaccgctccttctccccctcctcgacct
cctctgcaggacatgaaccggctgggaggggcgtccaggaaggcccgggcggaaggagca
gccaggaaggctcgggtggaaggagcgcagctgggaggagacgagtggacgcgccatggc
tcctttgtcaacaagcccacctgcggctggctgcactccgacagtgtggtcagcaccacc
ggcgtttcctacagtgtacggtacatgggctgcgtggaggtgctgcagtcgatgcgagcg
ctggacttcaacaccagaactcaggtcaccagggaggcgatctctgtggtgtgcgaggcg
gtgcccggagccaaaggagcccagcgcaggagaaagccttcctctcgctgtatgacatcc
atcctggggaagagtaacctgcagtttgccggcatgacaatcagcctcaccatctcgacc
agcagcctcaacctgctggccgcggactgtaaacagattatcgccaatcatcatatgcag
tccatctcctttgcctctggaggagacccagatacagctgagtacgtagcatatgtggcc
aaagacccggtcaaccagagagcgtgtcatatcctggagtgttcagagggtttagcccag
gaagtcatcagcaccatcggtcaagcctttgaactgcggttcaaacagtacctaaagaac
ccccccaaactggtcacacctcatgacagaatggctccgtttgacggctctgcatgggag
gaagaagatgatgaggctgctccacctcctgacgtcccttactataataatttccctgga
aaacagcctccccctggtggactgattgacatgaggacccgcccaggagccacgcttccg
tatggacagccaggccagaatgacattcacaagcagcctctgccgcctctaccagttggt
gccaaagaagggggacgggaaatgtttgatgacccttcatacgtcaacgtggacaaaccc
cgcctcccagttgcagctaatgggaatgctcacagagatgcttttgacatgaagccattt
gatgacgccctgggagtctccgggcaaggcgggcaaaactctgtgacaacggcgccccct
ctggtgcagcagctgcagggcgaggcctggttccacggtagcttaagtcgcagggaagca
gagaggctgctgacccgcgatggagactttctggtgcgagagtctgggaccacgcccgga
caatacgtcctcacgggacagcaggggggtcagcccaaacacctgctactagtcgaccca
gaaggagtggtccgtacaaaagaccatcggtttgaaagtgtgagtcacctgatcagctac
cacatggacaacaggctccccatcgtctcagctggtagcgaagtgtgtctgcaacagcca
gtagaacgcagagcctga
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