Anoplopoma fimbria (sablefish): 129109285
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Entry
129109285 CDS
T09102
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129109285 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afb03400
]
129109285 (rad54b)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
129109285 (rad54b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
129109285
NCBI-ProteinID:
XP_054477291
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All DBs
Position
20:complement(15326778..15339072)
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AA seq
931 aa
AA seq
DB search
MRRSGAPSQLLGNAVKKPRFVAPGASTSCLVAQSKPFTPKLGLGNALEKVQRSLAAPAQS
KTAYDVQPKAAQPAPALSRALARVLSAAESKENEAETEHPSNGSGEHTEDNRPAGVDGYP
QPPVSSLCVTGAVGSGCSQDGARYFSVMWCKASKKKHKRWEGDAVLVTRGRTATLKDMEG
KDIGKGSGYKVSVLASLSEGETLMIGGKEVEVMGLISAEDFASGRCFQEVQVEKEELQTK
AAPPPSRSLVSKRFCSPTLLGGANHPGSQPEEEQTCRPRHDPLAPGALVMPRPSANHQWS
NNKSGLPVVDVVIDPFLTNQLRPHQRDGLLFLYECVMGLRAVGRFGAILADEMGLGKTLQ
SVALSWTLLKQGPYGGKPVTKRVLVVTPGSLVHNWAAEFNKWLGRERISVFAVDQDHRIE
QFLISPLHSVLVISYEMLLRCLEQVQKVEFGLVICDEGHRLKNSSIKTSSAISSLSCSRR
VILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILRSRQPSCSEEESVLGEER
AAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCESSPLQRELYTHLLSHRVFRACLQGS
TQTHTHLACITALKKLCNHPGLLYSSAKEKADSGSVENSLYEGLVELFPESYSSGAFNTA
DSGKLLVLSNMLTAIRQLSPSDRVVVVSNYTQTLDLLQDLCVHAGYTFCRLDGHTPTNQR
QRLVDGFNSPYSQNFLFLLSSKAGGVGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQ
KKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDLGKRAEHTNFSSSELRDLFSLTDTL
SLTHDLLNCSCSMDGSVQPVLEEEEQVSERPCQLGRQGDRGVAQQKHLSMSELMQWRHFS
GDTYTFSDPYLDVARDHITFAFQTTISHTAP
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctcaggagctcccagccagctcttgggtaatgctgtgaaaaagccccggttt
gtggcccctggagcatctacttcctgtcttgtggctcaatccaagccctttacacctaaa
cttggtttaggcaatgcactggaaaaggtccagagaagtctagcagcaccagctcagagt
aaaacggcgtatgatgttcagcccaaagctgcccagcctgctccagccttgtcgagggct
ctggctcgtgttctcagcgcagcggaaagtaaggaaaatgaggctgagaccgaacatccc
agcaatggctcaggagagcacactgaagacaacagacctgcaggagtggacggataccct
cagcctccagtgagttcactctgtgtcactggagctgtcggctcgggctgcagtcaggac
ggagcgcgttacttcagtgtgatgtggtgtaaagccagtaagaagaaacacaagcgctgg
gagggcgatgcagtcctggttacaagaggacgcactgccacactgaaagatatggagggc
aaggacattggaaagggaagtggctacaaggtgtccgtgttggcctccctgtccgaggga
gagaccttgatgatcggggggaaggaggtggaggtgatggggttaatatctgctgaggac
ttcgccagtggccgttgcttccaagaggtccaggtagagaaagaggagctgcaaacaaag
gcagcgccgcctccctctcgtagcttggtgtccaaacgtttctgctccccaacactattg
ggtggagcaaatcatcccggatcccaaccggaggaagaacagacctgcagacctcgccat
gacccactggctccaggtgcactggtgatgcctcgtccctctgccaatcaccagtggtct
aacaacaagtctgggcttcctgtggttgatgttgtcattgacccgttcctgaccaatcag
ctgcgaccgcaccagagagacggccttctctttctctatgagtgtgtcatgggcttgaga
gctgtgggtcgctttggggctatcctggctgacgagatgggtctggggaagaccctccag
agcgtcgcactgtcctggactctgctcaaacaaggaccctacggtgggaaaccagtcact
aagcgtgtccttgtggtcacacctggcagcttagtgcacaactgggctgcagagtttaac
aagtggctcggccgtgagaggatcagcgtctttgctgtggatcaggaccaccggatagag
cagttcttgatctcccctctgcacagcgttcttgtgatcagctatgaaatgctgctgcgc
tgcttggagcaggttcagaaagtagagtttggtcttgtgatttgtgacgagggccacaga
ttaaagaacagcagcatcaaaacgtcctcagccatcagcagcctgagctgtagtcgcaga
gtcatactaacaggcaccccagtacagaatgacctgcaggagttctatgctattatagag
tttgttaacccggggatcctcgggtcgtccactgcttacagaaaagtatatgaggagcca
attctacgctccagacagccgtcctgctcagaggaggagagcgttttgggcgaagagcgg
gcagcagagctctctcgcctgactggcatgttcatcctgagacggacgcaggagatcatc
aaccgctacctgcctcctcgtctggactggacgttgttctgcgaatcgtcccctctgcag
agagagctgtacacacatctcctctcccacagagtcttcagagcctgccttcagggctcc
acacaaactcacacacacctggcctgcatcactgcactgaagaagctctgtaaccaccct
ggcctgctctactcctctgccaaggaaaaagcagacagtggttcagtggagaactcctta
tacgagggcttggttgagctcttcccagaatcctactcttcaggtgcatttaacacggct
gactctggaaaacttttggttctgtcgaacatgctgactgccatcagacaactcagccct
tcagacagggtggtcgtagtgtccaactatactcagacgcttgacctgctccaggacttg
tgtgtacatgcaggctacaccttctgccgacttgatggacacacacccaccaaccagaga
cagcggctggttgatggttttaacagtccctactctcagaacttcctgtttctgctgagc
tccaaagcaggcggcgttgggcttaatctggtgggggcctcccacctggtgctgtacgat
attgactggaaccctgccaatgacattcaggcaatggcccgagtgtggagagatggacag
aagaagactgtgcacatctatcgtctcctcactgcaggcactattgaggagcgaatattc
cagagacaggtgtccaaacaggggctctctgggacggtggtggacctgggcaaaagggcg
gagcacaccaacttctccagcagtgaactgcgagatctctttagcctgactgacacgctc
tctctaacacacgacctgctgaactgcagctgtagcatggacggctctgtccagcctgtt
ttagaggaagaggagcaggtttctgaaaggccgtgccagctcggtcgtcaaggtgaccga
ggagtggcccagcagaagcatctcagcatgtccgagctgatgcagtggagacatttctct
ggtgacacatacaccttctcagatccataccttgatgtcgcacgagaccacatcaccttc
gccttccagaccaccatctctcacacagctccgtag
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