Anoplopoma fimbria (sablefish): 129109293
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Entry
129109293 CDS
T09102
Symbol
ice1
Name
(RefSeq) little elongation complex subunit 1
KO
K26143
little elongation complex subunit 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129109293 (ice1)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Little elongation complex (LEC)
129109293 (ice1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
129109293
NCBI-ProteinID:
XP_054477300
LinkDB
All DBs
Position
20:4773368..4783935
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AA seq
1529 aa
AA seq
DB search
MMPGDSQSKTAAIAAEATVGNCQNCPVLHQSLTEYVSSFLALKQKITVTDDAIRLQQQLE
ELQIRLVTLEKKTADYESVQAELEEKKDALKTYEQMSEEMDKLKQQNSKTMAENKKLEDQ
LKDVKELTQSQSLENAQLTREKASVENDLLKTQISLRETQAQADQVEKLIEENAKTTSIK
DNLENKVRLLEDSVFKQNHQISQLTKDKILLERNIDDLQVRLMKLERERCKEYRSTSTQA
RAPEEPKVDKEKFQMLLQNLWSCVEPQQQQLSANLLDLTESGSKQVLPCSPQSRLHPHLS
CTSQSASHKTSESHSYPMQTNAAFTQFKPSPLRQKAIRQQVSLQSTSPMKKTDTPKKSKR
FSKENKTEESSADPGCLEVSVGEIMALFKPMLPCISPVPDLGRIQDKEIESMETTDGEKE
SPPKISDDGVLHLHEESLLITTSVTKHCPKSSGLPTEEKVDSPVVTTQGVEHSSNENVSK
DLGQNYLSGITELMGKSGTDGEEIHLRKHVPIEQDPATVPLLSASSSSSSSSTSDITILV
EVVSVTTESQEPSCSVNPSSSIANGFSQSENAFGSAKEDRSETVTKMDVDTNPSDVTGTE
TVTPEGGESPRSSDTTALSEETGNVQLVSSSVTSSAFIDSVTNTEVTNTENGSEIGKRHQ
DYQDTTVFKPQGNKSCLSEDTEVPDDNPRLSSSSDDIISVSNRNVEEGLESDASIKPFEE
EVGNKAQGAGVVDVAASSSESNGDNRPLSPGKSPLLKIEDDQPHAALESGQANVETPSKK
DVDMETLNSEMLADRGPSLSDSPETINCESLKESIHSACRQLSPTCLLPTLELHALTNLE
GVIEKANDQGLLQDSTDASNHKVSKYNLRSVKSTTSLKSAAATNGRNKCLESCIKVPEKQ
SPRVIREEKPSQIAGSTKAPPEYIGQVLSEMGPPLPCLLTPLRTPPKAGKSINPRQAIGK
LSFPSPMDRLASPTTPVQAHLTPNSQQLSSSSLNSPLPPNGVPSSPLQFGSATPKHAVPV
PGRLPLTAMNSSPSSSSSPSQENSMRILDTMYPELSAHGRTLSILRGNVGLSICSSESGT
SPTSTDSQMSCFKTVNSTSTAFTKTETRGAKRQADSLPQPKSSKCLRLDNCSPTVSRKQV
PSSSSNSGEETTSPQTPSIKPLKNETTSPSMKGGKPAEQNLIVHYLNKIENQGFDLLPVI
QSHLYVGNLPKKPVLRDEEKEVISKICSSLQADDMILAILNKLKAGKPDPSRNYMQALCR
VYTGICRQRRDWEKAHILAYSLLTEDYPDSAKLILFMVTTWPNVLSHKSALCQAIHTVTK
LKAQENILSCLSVFLGWEKSPPCDIDMLISRIVSDIQSGSSLSFTTHCRYGHDLGTEVWQ
NILTLQLLCTHKKWKWTYDNLLSKALWPLMNTWVTQPRDQQAPISDVTVATVLRLIGRLG
QLGIKERCVSSVVTVANVINTFGRHGRTEGVPWEVQLAAIYCIYDLSPCNPKQALDALAE
WRGETSQSVPPAVTSCINQLASVCRQVTS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaggggacagccagtccaaaacggcagcaatagccgcggaagcgacggtcgga
aactgtcaaaactgccctgttttgcaccagagcctgaccgaatatgtgtcgtcatttctg
gcactgaagcagaagataacggttaccgatgacgccatcaggctgcaacaacagctggaa
gagctgcagatcagattggttactctggagaaaaagacagcagattatgaatctgtgcaa
gcagaactggaggaaaagaaggatgctcttaagacctatgaacagatgtctgaagagatg
gacaaattgaagcagcaaaacagcaagacaatggcagagaataagaaacttgaagaccag
ctaaaggatgtgaaagaactgacacagtcacagtcacttgaaaacgcccagctgacgagg
gaaaaggcctctgtagaaaatgatttgctgaaaacacagatatctttgagggaaactcaa
gcacaagcggatcaagttgaaaaattgatagaggagaacgccaagacaacaagcataaag
gacaaccttgaaaataaagttagactgcttgaagattcggttttcaaacagaatcatcaa
atatcccaactgaccaaagataagattctgctcgagagaaatatcgatgacctccaggtg
agactgatgaaactggaaagagaaaggtgtaaagaatataggagcacatcaactcaagca
cgtgcacctgaggagcctaaagttgacaaagaaaagttccagatgctgctacagaatttg
tggtcgtgtgtggaacctcagcagcagcagctctctgccaacttgttagacttaactgag
tccggatccaaacaagttctaccctgctccccacaaagcagactgcaccctcatttgagt
tgcacatcccagtctgcttcccacaagaccagtgaatcccacagttaccccatgcaaacc
aatgctgcttttacacagttcaaaccctctcctcttaggcagaaagccatcaggcagcaa
gtatctctgcagtcaacaagtcccatgaagaaaacggacactccaaaaaagagcaagcgg
ttctccaaggaaaacaaaactgaggagtcatctgctgacccgggctgtttggaagtatct
gttggggagataatggcattgttcaaaccgatgcttccctgcatatcacctgtaccagat
ttggggagaattcaggacaaagagatcgaatctatggagacaactgatggcgaaaaggaa
agccctcctaaaatctctgatgatggtgttcttcatctacatgaagagtccctactcatc
acaacatcagtaaccaaacactgtccgaaatcttctggactgccaacagaggagaaagtt
gactcgccagtggtcacaacacagggagtggaacacagctccaatgaaaatgtgtccaaa
gacttgggacaaaactatttgagtggcattactgaactgatgggaaaaagtggcacagat
ggtgaggaaatacatcttcgaaaacacgtgccgattgagcaggacccagcaactgtgcca
ttactgtcagcatcatcatcatcatcttcttcttccacatcagacattacaattttggtt
gaggttgtctcggtaactactgaaagtcaagagccatcctgcagtgtaaatcccagtagc
agcattgccaatggcttctctcaaagcgaaaacgctttcggaagtgcaaaggaagatcgg
tcagagacggttacaaagatggatgttgacacaaaccccagtgatgttactgggactgaa
accgtcactcctgagggtggagagtcacccagaagtagtgatacaactgcactctctgaa
gaaacaggaaatgtacagttagtttcttcctcggttacttcctcagcattcattgactct
gtgacaaacactgaggttacaaatacagaaaatgggtcagaaataggaaaaaggcatcag
gactatcaagataccaccgtctttaaaccccaggggaataaaagctgtcttagcgaggac
acagaagtaccagacgataatccccgtttgtcaagcagcagtgatgacatcattagtgtc
tcaaatagaaatgttgaagaagggcttgaaagtgatgcatccataaaaccttttgaagag
gaagttgggaataaagcccaaggagctggagtagttgatgtagcagcttcttcctcagag
tcaaatggtgataacagacctctgtctcctggcaagtctccactgttgaagatagaagat
gatcagccccatgctgccttggaatctggtcaagcaaacgttgaaactccttcaaaaaag
gatgttgacatggagacgttgaacagtgaaatgcttgcagatcgtgggccttccctctct
gactccccagagaccatcaactgtgaatctctgaaagaaagtatacattcggcatgcagg
cagttgagtcctacatgtctgttgcccactctggaattgcatgctttgactaatttagaa
ggtgtcattgaaaaggcaaatgaccaaggcctgcttcaggacagcacagacgcaagtaac
cataaagtgagcaaatataacttgcgctctgttaagtctactacctcattaaagagtgct
gccgccacaaatggacgaaataaatgtttggagtcgtgtataaaagtccctgaaaaacaa
agccctcgtgtaattagagaggaaaaacctagccaaattgcaggttcaactaaagctcca
ccagaatacataggccaagttctctctgaaatgggccctccacttccttgtcttctaacc
cccctgagaacgcctccgaaggcgggcaaatcaatcaatcccaggcaggctattgggaaa
ctctcatttccttcgcccatggatagattggcttcccctaccacccctgtccaggcccac
ttgacacccaacagccagcagctgagttcctcatctttgaacagtccacttcctccaaac
ggagtcccctcatcaccacttcagttcggctctgccactccaaaacatgccgtgcccgtt
ccaggtcgcctgcccttgacggcaatgaattcctccccgtcgtcttcctccagtccatcg
caggaaaactccatgaggattcttgacaccatgtacccagagctctcagcgcacggccga
actctgagcattctcagaggcaacgtcggcctcagcatctgttcatcggagagtggaaca
tcgcctacatcgaccgacagtcagatgtcttgcttcaaaactgttaactccacttcaacg
gccttcaccaagactgagacgagaggagcaaagagacaggccgatagtctgcctcaacct
aaaagcagcaaatgtctcaggctggataactgctctcctaccgtcagtcgcaagcaggtg
ccttcctcctcctcaaacagtggagaggagaccacctcaccccagactccgagcatcaag
ccgcttaaaaatgagacaacctctccatccatgaaaggtggaaagcctgcggagcaaaat
cttatagtacactacttaaacaagattgaaaaccagggttttgatctattgcctgtgatc
cagagccacctgtatgttggcaacctgcccaaaaagcctgttttgagagacgaggagaag
gaggtgatctctaagatttgcagctcgcttcaggcagatgatatgattttggccatcctg
aacaagctgaaagcaggaaaaccagatccaagcaggaactacatgcaggccctctgtaga
gtgtacacagggatctgtagacagaggagagactgggagaaggctcacatcctggcctac
agccttctcacagaagattacccagactccgctaagctgattctgttcatggtgacaaca
tggcccaatgttctttcacacaagagtgctctgtgccaggcaatacatacggtcaccaaa
ctgaaggcacaagaaaacatcctcagctgcctttcagtattccttggttgggagaagagt
cctccctgtgacattgacatgctgatctccagaatagtctctgatattcagtccgggtcg
agcctgtctttcaccacacattgccgctacggccatgaccttgggacagaggtttggcag
aatatcttaacactgcaactcctttgtactcacaagaagtggaagtggacctatgataat
ttattgagcaaagcgttgtggccattaatgaacacttgggtgacacagcccagagatcaa
caagcacccatctctgatgtgactgtcgccaccgtactccgactcataggacgcctcggt
caactgggaatcaaagagaggtgtgtttcctccgtggtaactgtcgccaacgtcatcaac
acgtttggtaggcatggacggactgaaggtgtgccatgggaggtccagttagcagccatc
tactgcatctacgacctgtctccctgcaaccccaaacaagccctggatgccctggcagaa
tggagaggagagacgtctcagagcgtccctcctgcagttactagctgcattaaccagtta
gcctctgtctgcagacaggttacgagctga
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integrated database retrieval system
