Anoplopoma fimbria (sablefish): 129109304
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Entry
129109304 CDS
T09102
Name
(RefSeq) protein SOGA3
KO
K27704
microtubule cross-linking factor
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129109304
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129109304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
ATG16
TSC22
YabA
Ax_dynein_light
Halo_GVPC
bZIP_1
APG6_N
Mto2_bdg
Dcc1
Fez1
Motif
Other DBs
NCBI-GeneID:
129109304
NCBI-ProteinID:
XP_054477308
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All DBs
Position
20:5955085..5959935
Genome browser
AA seq
843 aa
AA seq
DB search
MMNPSSADSPRQPDNSSRKQQRSSSPAGPKDGASKATQKGSNSSKAITSKQGGGGGGGGG
GGGGRNSRGHSPVSTGRERQATVRGAAAVQPAGAESPTLSRPAAATPEDSPRPVADASSP
SRGDPSRVVSDQPCSSKSPKLRSKNPRGGDAAAAATTSGNKKSSKSTIGCGPGFWKEGCL
QSELIQFHLNKSLGKKGTKMQTKAASPPASEPELSPEPDCPKPAPQPDQGLQEDIEKLED
ENEDLKTEIEEMRAEMDEMRDTFYEEDACQLQDMRRELERANKNCRILQYRLKKAERKRL
RFAETGQVDGELLRSLEQDLKVAKDVSVRLHHELESVEEKRTKTEDENEKLRQQLIKVEI
TKQALHNELEKTKELSLKRKGSKDGQKAERRTPQTPIEEENEDLKCQLAFIKEEATLMRK
KMAKIDKEKDRLDHELQKYRSFYGDVDSPLPKGEAGGPPTTRESELKLRLRLVEEEANIL
GRKIVELEVENRGLKAELDDMREDSLVAAGVDSSGIGGQQCREQGEALSELRQQLQLVED
EAELLRRNLADVEEENKKVTNELNKLKYKAGSHEAGSRHGGGGADPAKMEAVQEELKAAR
LQINELSGKVMQLQYENRVLLSNMQRYDLASHLGIRGSPRDSDAESDGGRDDDTPSASAS
SPRLLPPHRKREGPIGGESDSDEVRNIRCLTPTRSLYSPVESRFLSRSLKDRQQMIDIRI
EAERLGRTIDRLIADTSTIIAEARVYVNNGELFARLEEDEEGGRIREHELLYRINAQMKA
FRKELQGFIDRLDVPKPEDKQEEEPLSMFQPIILLILILVLFSSLSYATIFKLVFLFTLF
FVL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacccatcctctgccgactcaccgcggcagccagacaatagcagccggaagcag
cagcgctcgtcgtctccggccgggcccaaagacggtgcatctaaagctacacagaagggc
agcaactcgtcaaaggccatcacgtcaaagcaaggaggaggaggaggaggaggaggagga
ggaggaggagggagaaacagccgaggtcattctcccgtctccacaggcagggagcggcag
gccaccgtcagaggcgcggctgctgtccagcctgctggtgctgaaagcccgacgctgagc
aggccggcggcggcgacaccggaggactccccccgccctgtcgccgacgcctcctccccc
tccagaggagatccgagccgcgtcgtctccgatcagccctgctcatccaagtctcccaag
ctgaggagcaaaaatccgagaggaggggacgcggcggcggcggccacgacaagcggcaac
aagaagagctccaaaagcacgataggctgcggacccggtttctggaaggagggatgcttg
cagtccgagctcatccagttccatttgaataagagcctggggaagaaagggacaaagatg
cagacgaaagcagcgtcaccgccggcctcggagccggagctgtcccccgagccagactgt
ccaaaaccggctccacagccagaccagggactccaagaagatattgagaagctcgaggat
gaaaatgaggatcttaagacggaaatcgaggagatgcgggcagagatggatgagatgcgt
gacaccttttatgaggaagacgcctgccagctgcaggacatgcgcagagagctggagaga
gccaacaagaactgtaggatccttcagtaccgactgaagaaggccgagaggaaaaggctc
cgtttcgctgaaactggccaggtggatggagagctgctccgaagtctggagcaagacctc
aaggtggcgaaggatgtgtctgtgcgcttgcaccacgagctggagagcgtggaggagaag
aggaccaagacagaggacgagaatgagaagctgaggcagcagctgataaaggtggagatc
accaagcaggccctgcataatgaactggagaaaaccaaagagctctcactgaaaagaaaa
ggaagcaaggatggacagaaagcagagagaaggacaccacagacacccatcgaggaagaa
aatgaggatttgaaatgccagctggccttcatcaaggaggaagccaccttgatgaggaag
aaaatggcaaagattgacaaggagaaggaccgactggaccatgagctgcagaagtatcgc
tccttctacggagacgtggacagccccctgcctaaaggagaggccggagggccacccacc
acccgcgaatcagagctgaaactccgcctacgcctggtggaggaggaggcgaacatcttg
gggaggaagattgtggagctggaggtggagaacagggggctgaaggctgaacttgacgac
atgagggaggacagtctggtggcagcaggagtggacagctctggtattggaggtcaacag
tgcagagagcagggcgaggccctgtcagagctgaggcagcagcttcagctggtggaggac
gaggcagagcttctccgcaggaatttagcagatgtggaagaagagaataaaaaggtgacg
aatgaactcaataaactgaaatacaaggctggatcccatgaagctggatcgagacatgga
ggaggaggagctgaccccgctaaaatggaggccgtccaggaggagctgaaggccgcacgt
ctgcagataaatgaactgagcggcaaagtcatgcagctccagtatgagaaccgcgtgctg
ctctccaacatgcagcgctacgacctggcatcccacctgggcatccgtggcagcccccga
gacagtgacgcagagagcgacggagggcgggacgacgacaccccctcggcctcggcatcc
tcccctcgcctcctccctccccaccgcaagcgcgagggccctataggaggggagagtgac
tcggacgaggtgaggaacatccgctgcctcaccccgacacgttccctttactcccctgta
gagagccgttttttatccagaagcctgaaggaccggcagcagatgatagacatccgcatc
gaggcggagaggctgggtcggaccatcgataggctcatcgctgacaccagcactatcatc
gccgaggcccgagtgtacgtcaacaacggggagctgtttgccaggctggaggaggacgag
gaaggtggcaggatcagagagcatgagctgctgtaccggatcaacgcccagatgaaagcc
ttcaggaaggagttgcagggcttcatagaccggctggatgtccccaagccggaggataaa
caggaggaggagccactctctatgtttcagcccattattttgctgatcctcattcttgtt
ctgttttcctcgctctcgtatgccaccatctttaaattggtattccttttcaccctgttt
tttgttctgtaa
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