Anoplopoma fimbria (sablefish): 129109365
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Entry
129109365 CDS
T09102
Name
(RefSeq) lamin-A-like
KO
K12641
lamin A/C
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04210
Apoptosis
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129109365
09142 Cell motility
04820 Cytoskeleton in muscle cells
129109365
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129109365
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
129109365
BRITE hierarchy
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GFIT
Motif
Pfam:
Filament
LTD
Laminin_II
CCDC39
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
129109365
NCBI-ProteinID:
XP_054477377
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Position
20:complement(22371872..22409703)
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AA seq
663 aa
AA seq
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METPSTKRTTRGTPSVSPARITRLQEKEDMINLNDRLAIYIDKVRSLESENAGLRLRITE
SESSITRDMSGIKGAYEAELADARKTLDQVAKERARMQLELSKLREDHMELKARNGKKES
DLEAALIRLRDLEALLNSKDAALSTAIGEKRTMEAELKELKAQLAKLEGSLADTKRQLQD
EMLRRVDAENRLQTIKEELEFQKNIYNEERREARSRKEFSMEETSNTRQRDFESKLAEAL
IEMRAQQEEQVRLYKEEVERTYNSKLENARHSADSNSHMVGAAHEELQQTRMRVEGMSSQ
LSLLQKQLAASESKVRELEEAMSRERDMMRRRMEDKEREMANIRARMQQQLDEYQELLDI
KLALDMEISAYRKLLEGEEERLHMSPGSTPGTKVTVTKTSGSSHGHTSRLVQSSGSGHSH
TSRLLHGTGTGTATATATSSRNSSGTATTKKRRLNDNDSDTSSMVGGTVTKTRISQQASA
SGRITVDEVDLEGKFIRLSNKADEDQSLGNWQVKRQIGSSTPIIYKFPHKFTLKAGANVT
IWAASGGGTHNPPSDLVWKHQISWGTGDLLQTSLISANGEEMAMRKVTRTLFRDDEDDGA
HSTSDGDNEYNLRSRTVICNSCGQTSDRSSCGGLPEGIVGLHSFMGTNEPRKGRGKPENC
SVM
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccccgagcacgaaacgcaccacccgtgggaccccctccgtctccccggcccgc
atcaccaggctgcaggagaaggaggacatgatcaacctcaacgaccggctggccatctac
atcgacaaggtgcgctccctggagtcggagaatgccggactgcgtctgcgcatcaccgag
tcggagtcctccatcacccgcgacatgtcgggcattaagggggcctacgaggccgagctg
gccgacgcccgcaagaccctggaccaggtggccaaggagcgagcacgcatgcagctggag
ctgagcaagctgagggaggaccacatggagctcaaagccaggaatggtaagaaggagtct
gacctggaggcggctctgatccggctgagggacctggaggccctgctgaactctaaagat
gccgccctatccactgccatcggggagaagcggaccatggaggctgagttgaaggagctc
aaggcccagctggccaagttggaaggcagcctagccgataccaagaggcagctgcaggat
gagatgctgaggagagtggacgccgagaaccgcctgcagaccataaaggaggagctggag
ttccagaagaacatctacaacgaggagcggcgtgaggcccggagtcgcaaggaatttagc
atggaggagacatccaacacgcggcagcgggactttgagagcaagctggccgaagccttg
atcgagatgagagcccaacaggaggagcaggtccgcctctacaaggaggaggtggagagg
acctacaactccaagctggagaacgctcgtcattcagctgacagcaacagccacatggtg
ggagccgctcacgaagagctgcagcagacccgcatgagagtggagggcatgtccagccag
ctcagcttgctgcagaaacagctggcagcgagcgagtccaaggtgcgggagctggaggag
gctatgtcaagggagcgagacatgatgcggcggcggatggaggataaagagcgggagatg
gccaatatccgggctcggatgcagcagcagctggacgagtaccaggagctgctggacatc
aaactggccctggacatggagattagtgcgtacaggaagctgctggagggagaggaggag
aggctgcatatgtcacccggctctacacccggcaccaaggtcacagtgacgaagacctcc
ggctccagccacggccacaccagccgcctcgtccagtcctctggctcaggtcacagccac
accagccgcctcctccacggcaccggcactggcaccgccaccgccaccgccaccagcagc
cgcaactcctccggcacagccaccaccaagaagcgccgcctcaatgacaacgacagcgat
acgtccagcatggtgggcggcactgtgaccaagactcgcattagtcagcaagcctcagcc
agcggccgcatcacagtggacgaggtcgacctggagggcaaattcatccgtctgagcaac
aaggctgatgaggaccaatctctgggtaactggcaggtgaagagacaaataggaagctcc
actcccatcatctacaagtttccccacaagttcactctgaaggccggagcaaatgtcact
atctgggctgcttccggcggtggaacccacaaccccccctccgacctggtgtggaagcac
cagatttcctggggaaccggcgacctcctgcagacctccctcatcagcgccaacggagag
gaaatggccatgaggaaagtgacacgtaccctgttccgtgatgatgaagacgatggagct
cacagcacgagtgatggagacaacgagtacaacctccggagccgcacggtgatctgcaac
tcctgcgggcagacgtcggaccgctcaagctgcgggggtctacctgagggcatcgtggga
ctacactctttcatggggaccaacgagcccagaaagggccgtggcaagccggagaactgc
tccgtcatgtaa
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