Anoplopoma fimbria (sablefish): 129109396
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Entry
129109396 CDS
T09102
Name
(RefSeq) ankyrin repeat and IBR domain-containing protein 1-like
KO
K11967
ankyrin repeat and IBR domain-containing protein 1 [EC:
2.3.2.31
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129109396
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129109396
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129109396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Ariadne
Ank_5
Ank_2
Ank
IBR_2
Ank_4
UBA_ARI1
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
Rcat_RNF216
zf-C3HC4_4
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129109396
NCBI-ProteinID:
XP_054477435
LinkDB
All DBs
Position
20:5442595..5472481
Genome browser
AA seq
1116 aa
AA seq
DB search
MGNTATKFRKALINGDEVLACQLYESNPQFKEALDPNSTYGESYQHNTPLHYASRHAMAR
LLRSFLYSKDGNPNKRNVHNETSLHLLCMGPQILTSEGALQPRISRPYEDKQRRAESLQV
ILAWTGAKLDQGEYESADINATDNKKNTCLHYAAASGMKTCVELLVEREADLFAENEDRE
TPCDCAEKQHHKELALCLESQMVFSLAPEAEGIEAEYAALDRREMYEGLRPQDLRRLKDM
LIVETADMLQAPLFTAEALLRAHDWDREKLLEAWMSNAGECCQRSGVQMPNPPPSGYNAW
DTLPSPRTPRTTRSSITSPDQISLMPAEEESSLCGICMSSISVFEEPVDMSCGHEFCRAC
WEGFLNLKIQEGEAHNIFCPAFDCYQLVPVEVIESVVSREMDKRYLQFDIKAFVENNPAI
RWCPVAGCERAVRLSTQGPGTSNSDSLSFPLLRAPAVDCGKGHLFCWECQGEAHEPCDCD
TWKLWLQKVNEMRPEELAGVSEAYEDAANCLWLLSNSKSCANCKSPIQKNEGCNHMQCAK
CKYDFCWICLEEWKKHSSSTGGYYRCTRYEVIQQVEEQSKEMTEEAEKKHKGFQELDRFM
HYYTRFKNHEHSYQLEQRLLKTAKEKMEQLSRALSGRERGPPDTTFIEDAVLELLKTRRI
LKCSYPYGFFLEPKSTKKEIYELMQTDLEMVTEDLAQKVNRPYLRTPRHKIIRAACLVQQ
KRQEFLASVARGVAPNDSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGD
MSSLRSNTPDPDDSSDSILDTQDGGRRHHLMGLGSLDDDDPNILLAIQLSLQDSAMAEIA
SNHDVFANEASLGAIGTSLPSRLDQSAPGVEVLSRASLSSSELLELGDNLSRLGNINISS
QYSAASTSVQHSDSHHRAYGASVPIPVAPGGSNSSTGLFSSSSDTLDSTTCGSHDPSTSS
ALAANANLLGNIMAWFHDMNPQGITLVPSTSSDTDSNLGSLHAGGDGCPQDDEKGGGVLP
ESRKPQEVMAEVGFCSQRLSDMEEKECAAAQRPTQLDLVGLDTMPLPYMATPDTSGDHAE
RGGSKVCHVDTPRCDSVSDQLPSSSSSEWEDQVHLV
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacggcaaccaagttccgtaaggctctcatcaatggggacgaggtgctggcc
tgccaactgtacgagagcaacccacagttcaaggaggctctggatcctaactctacatac
ggagagtcctaccagcataacactccactgcactatgcttcccggcacgccatggcccgc
ctactcaggtctttcctctatagcaaagatgggaatcctaacaagcgtaatgtgcacaat
gagacatctctgcaccttctctgcatggggcctcagatcctgacctcagagggggcgctg
caaccccggatctcacggccatatgaagacaaacaacgtcgggcagaatccctacaagtc
atcctggcatggaccggagcaaagctggaccagggagagtacgaaagcgctgatatcaat
gccactgacaacaagaaaaacacctgcctgcactatgctgctgcctcaggcatgaagacg
tgtgttgagttactggtggagagagaagcagacctgtttgctgagaacgaagaccgcgag
actccatgtgactgtgcagagaagcagcaccacaaggagttggccctgtgcctggagtcg
cagatggtcttctctcttgccccggaggcagagggtatagaggcagagtacgcagccctt
gaccgaagagagatgtatgaaggactgcggcctcaggatctacggaggctgaaggacatg
ctgatagtggagacagccgacatgctgcaggcccctctattcactgcagaagcactgcta
cgtgcccatgattgggacagagagaagctcctagaggcctggatgagcaatgcgggggaa
tgctgccagcgctcgggtgtacagatgcccaacccgcctccaagtggttacaatgcctgg
gacacgttgccctcaccccggacgccacgcaccacccgctcctccatcacttccccagac
caaatcagcctcatgcctgcggaagaggagtcctctctgtgtggcatctgtatgtcttcc
atttccgtcttcgaggaacctgttgacatgtcctgtggccatgagttctgcagagcatgc
tgggaagggtttcttaatctaaagatccaggagggtgaagcccacaacatcttctgcccg
gcctttgactgctaccagctagtgcctgtggaagtaatagagagcgtggtgtctagagag
atggataagcgctacctacagtttgacatcaaggcatttgtggagaacaatccagcaatc
cgctggtgtcctgtggcagggtgtgaaagggcagtaagactgagcacccagggcccaggg
acctccaactcagactctcttagctttcccctccttcgggctccagccgtagattgtggc
aaaggccacctcttctgctgggagtgtcaaggcgaggcccatgagccctgtgactgtgat
acctggaagttgtggctacagaaagtcaatgagatgagacctgaggaattggctggtgtg
agcgaagcttacgaggatgcagccaactgcttgtggttgctctctaactccaaatcctgc
gccaattgcaagtcaccaatacagaaaaacgagggctgcaaccacatgcagtgtgctaag
tgtaagtatgacttctgttggatctgtctggaggagtggaagaagcacagctcatcaaca
ggaggctactatcgttgtactcgctacgaagtcatccagcaggtggaggagcagtcaaag
gagatgactgaagaggcagaaaagaagcacaagggctttcaggaactcgaccgttttatg
cactactacacacgcttcaagaaccatgagcacagctatcagctggagcagcgcctgtta
aaaacagccaaagagaagatggagcagctcagtagagccctgagtggaagggaaagaggc
ccaccggacactacattcattgaagatgcggtcctggaactactaaagactcgccgcatc
ctgaagtgctcttatccttacggattctttctggagcccaaaagcacaaagaaagagatc
tacgagcttatgcagaccgacttggagatggtgactgaggacctggcacaaaaggttaac
cggccttatctacggacgccgcgccacaaaatcatccgtgcagcatgtcttgttcagcag
aagaggcaggagtttctggcctcagtagccaggggagtggccccaaacgactctcctgag
gcccccaggcgcagttttgctggcggaacgtgggactgggagtatttaggctttgcatca
cctgaggagtacgcagagttccagtacagacgaagacataggcaacggaggcgaggtgac
atgtccagtctccgtagcaacacacctgaccctgatgactccagcgacagcattttagac
acacaggatggtggacgtagacatcatctgatgggactaggttctttggatgatgatgac
ccgaacattttgctggccatccagctgtcactccaggactcggcgatggcagagattgcg
tccaaccatgacgtatttgccaacgaagcctcactcggcgctatcggcacctcgctgcct
tctaggcttgaccagagtgctccaggtgtagaggtcctttccagagcttctctaagcagc
tcagaactgctggagctgggagataacttgtctagacttggcaacatcaacatcagcagc
cagtactctgctgcctccacctctgtgcagcatagtgacagtcaccaccgggcctacggg
gcttcagtgccgataccagtggctccaggaggcagcaactcatcaacgggcctcttctca
tcttccagcgacactttagactcgaccacatgcggcagccacgacccatccacgtcctct
gcattagcagcaaacgctaatttgctgggcaacatcatggcatggttccacgacatgaat
cctcaaggtatcaccctggtcccctcaacctcctctgacactgactcaaaccttggctca
ctccatgcaggcggagatgggtgcccgcaggatgacgagaaaggtgggggcgtcctgcct
gaaagcaggaaacctcaggaagtgatggcagaagtgggtttctgctctcagagactgagc
gacatggaggagaaggagtgtgccgccgctcagaggccgacacagctagatctagtgggg
ctggacaccatgccgctaccctacatggccacccctgacacaagcggagaccatgccgaa
cggggaggctctaaggtctgccacgtcgacactccgcgatgtgactctgtgtccgaccag
ctgcccagcagcagctcctctgagtgggaggaccaagtgcacttggtatga
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