Anoplopoma fimbria (sablefish): 129109401
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Entry
129109401 CDS
T09102
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129109401 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129109401 (prpf3)
Spliceosome [BR:
afb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129109401 (prpf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
129109401
NCBI-ProteinID:
XP_054477440
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Position
20:16431659..16438793
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AA seq
707 aa
AA seq
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MSLPKREVEEMRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTADQLRPFLDDSAG
GFVECLFEALEESRSSRGNKGAGEKHRKRDLKVSKKDVFGDEAEIGVVREAPDTGDMTAP
KRKRVPRFEEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSSVPAA
QSQMESPPVSRLLGTSAGAASVGASSIPPSQAASFMNDAIEKARKAAELQARIQSQLAMK
PGILGALGNTGPHNLVALANLHAMGIAPPKVEIKEINKPTPLILDDKGRTVDASGKEVEL
THRMPTLKANIRAVKREQFRQQLKEKPQEDLESTSYFDQRVTITPAQRLRRGFKFHDQGR
FEKIAQRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPKKEIGDGEVPNIEWWDSYI
LPYNIDITTDTSFEELEFFGVTNLVEHPAQISPPVDTDKPVTLGVYLTKKEQKKLRRQTR
REGQKEVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHED
ANAARKLTSEQRKEKKVKRLKEDLSDGVHIAVYRIRNLHNPAKKFKVEANANQLYLTGTV
VLHRDVNLVVVEGGPKSQKKFKKLMLHRIKWEEHNSKRDDPDADDDTKRNNKCWLIWNGT
AKERSFGEMKFKQCPTENMAREHFKKHGTEHYWDLALSKSVLDNPDD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaaagagaggtggaggagatgaggccgtgggtggagcggacggtgaag
aaggtcctgggtttctcagagcccacagtggttactgctgctttgcactgtgttggaaaa
ggactggacaaaaggaagaccgcggaccagctacgtcccttccttgatgactctgctgga
ggttttgtggagtgtctttttgaggctttggaggaaagccgcagttcacgtggcaacaaa
ggagcaggagaaaagcaccgcaagagagacctcaaggtaagcaaaaaggatgtatttggt
gatgaggctgaaattggtgtcgtgcgagaagctccggatacaggagatatgacggcaccg
aagaggaaacgggtccctcgcttcgaggaggtggaggagcctgaggtcatacctggacct
ccatctgagagccctggcatgctcaccaaaatgcagataaaacagatgatggaagctgcc
acaaaacagatagaagagaggaagaaacaactgagcttctcctcttcagtccctgctgca
caatcacagatggaatcccctccagtctcacggcttctcggcacatccgctggtgcagct
tcagttggggcctcatctatccccccgtcccaggcggccagctttatgaatgatgctatc
gagaaggcccgcaaggctgctgagctacaggcccgcatccagtcccagttagccatgaaa
cctggtatcctgggagccctggggaacactgggccccacaacctagtggcactagctaat
ctacacgctatgggaattgccccaccgaaagttgaaatcaaggagattaacaagccaacc
cctcttattctggatgacaaggggagaactgtggatgctagtggcaaagaggttgaactc
acacaccgcatgccgacactgaaagctaacattcgagcggtaaagagggagcagttccgt
cagcagctgaaggagaagcctcaggaggacttggagtccacgtcctacttcgaccaacgt
gttactattacaccggctcagcgccttcgcaggggcttcaaattccatgaccaggggcgc
ttcgagaagattgctcagagaattagaactaaggcccagttggaaaggttgcaaaatgag
attgcccaggcagcgaagaagacaggaatccaggcatccacaaagctggcactgattgcc
cctaagaaagagattggagacggcgaggtgcccaacattgaatggtgggactcctacatc
ctgccctacaacatagacataacaaccgacacatcatttgaagagttggagttttttggt
gtgaccaatctggtagaacatcccgcccaaatcagccctccagttgacacagataagcca
gttacgctgggcgtttacctgacaaagaaagaacagaagaaactaagaagacagacacga
agggagggacaaaaagaagttcaagagaaggttcgactgggactgatgcctccaccagaa
cccaaagtacgcatctccaacctgatgagagtcttggggacggaggccgttcaggacccc
acgaaggtggaggcccacgtcagagcgcagatggccaagagacagaaggctcatgaggac
gccaatgcagcccgcaagctcacatcggagcagaggaaagagaagaaggttaagaggtta
aaagaagacctcagtgatggtgttcacattgccgtctacaggatccgtaacctgcacaat
cctgccaagaagtttaaagtggaggccaatgccaaccagctgtacctgacaggcacagta
gttctgcacagagatgtcaaccttgttgtggtggagggaggccctaaatcccagaaaaag
ttcaaaaagctgatgttgcatagaatcaaatgggaggaacacaacagtaaaagagatgat
ccagatgctgatgatgatacaaagaggaacaacaagtgctggttaatttggaacggcacc
gctaaagagcgtagttttggtgagatgaagttcaagcagtgccctacagagaacatggcc
agagaacacttcaagaaacacggcacagaacactactgggatctagctctcagcaagagt
gtgttggacaacccagatgactga
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