Anoplopoma fimbria (sablefish): 129109448
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Entry
129109448 CDS
T09102
Symbol
cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129109448 (cdh17)
Cell adhesion molecules [BR:
afb04515
]
Cadherins
Major cadherins
129109448 (cdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Cadherin_CELSR2_9th
RibLong
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
129109448
NCBI-ProteinID:
XP_054477494
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All DBs
Position
20:complement(15305587..15316801)
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AA seq
871 aa
AA seq
DB search
MTPMVHLLLLPLLFSIAGGKDLEEKKGPFENTELGVPEGTPVPYPMYQFQVTHPGVNSFR
LSGEGKEDIMISKDGWLYLEKPLDWSRDDHYIIMVEALADEEVVEGPVYVTINVLDINNN
APVFNQSEYTAVVRENNPAGIPFTRVFALDQDDPETPNAHLSYSLVSQIPNKHHTPLFQI
DPDTGEISTTEAGTQILKAREGIQYGKGEDQSIDALRTKFNDYCPVQNIPFEDNPFFTCV
ERAEMRRRNVDPLADPDYTLTVRVQDLGGALQTALSGNTRVHIVVQQNLWVNPGPITVKE
HLKETYPLVIAKVQSNEPNAVYTLAQKERELKFPFQITEDGEIHLTEELDREDKDMYILV
VFAVDNDDNQVDPPMEIQVLVEDVNDNAPVCANEESVFEVQEGEPVGSLIGQLLAHDDDQ
DGTLNAQLTYTIVSQNPPTSPNVFSIDDASGTIQALSSLQRRDQQVYNLNVRVTDQVFST
ECKVVVKVIDVNNEMPLFEKMDYGSHTLSEDTPVGHTVLSISATDSDDPDSGSSLIEFHI
TAGDDNEVFAVETDGKGVGHLVVVKPLDFESSATYKLQIDARNPEPLMTGLEYGSESTAF
VSVSLTDVDEDPEFTLDILDVTVPENTTKGSVLLTVEAKDPEGKEISFKMDGDTRGWLEI
NAATGEIKTKAKLDRETLETFEVTVTAFEKENPAKSSERVVSVRLLDVNDNVPKLMETQA
FICVKKPEPVIIKAQDTDSAPFGQPFTFAFAHGKKSPNWELKSIDGTTAKLTLKKSPTED
KTFSIPINIKDNAGMGVTQLFEVRVCNCTELGYCYMAPEERSLSYGMGATIGILGGTLGF
CLIVFIIVIKRVNKGGNKTTLTEEEERNAIM
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacacccatggtgcatctgttgttgctcccactcctgttcagcatcgctggtgggaag
gatctggaggaaaagaagggcccgtttgagaacacagagctaggtgtgccagaggggaca
ccagtgccatatcccatgtatcagtttcaggtgacccatccaggagttaatagtttcagg
ttgagtggagaaggtaaggaagacattatgatttcaaaggacgggtggctgtacctggag
aagcctctggactggtctcgagatgaccattacattatcatggtggaagcgctggcagat
gaggaagttgtggaaggcccagtttatgtgaccataaatgtgttggacatcaacaacaat
gctccagtcttcaaccagagcgaatacacagctgttgtcagagaaaacaatccagcgggt
atcccatttactcgggtgtttgcgttggatcaggatgacccagagactcccaacgctcat
ctgagctacagcctggtcagccagatccccaacaaacaccacaccccgctgttccagatc
gaccctgacactggagagatctccaccacagaagcagggacacagatacttaaagccaga
gaaggcatccagtatggcaaaggagaagatcagagcattgacgctctgaggacaaagttt
aacgactactgtccagtgcagaatatcccctttgaagataaccccttcttcacctgtgtg
gagagagcagaaatgaggaggagaaatgtggaccccctggcggacccagactacaccctg
actgtgcgcgtccaggacctgggaggagcattgcagaccgcgctgagtgggaacaccaga
gtgcacattgtcgtgcagcaaaacctatgggtcaatcctggacctataacagttaaagag
cacttaaaggaaacgtaccctctggtcatcgcaaaggtccagtctaatgagcccaacgcc
gtgtacacgttagcgcagaaagaacgcgagctgaaattccccttccagatcacagaagat
ggagaaatacatctgacagaggagctggacagagaagacaaagacatgtacatcctggtg
gtgtttgcagtagataatgatgacaatcaggtggatccacccatggagattcaagtcttg
gtggaggatgtgaatgacaacgcaccagtgtgtgcaaatgaggagagtgtatttgaggtg
caggagggcgagcctgtaggcagcctgattggacagctgttggcccatgatgacgatcaa
gacgggacactgaacgctcagctgacttacaccatcgtgtcccaaaatccacccacctca
cccaacgtcttctccatcgacgatgcttccggaacaatccaggcattaagctcgctgcag
cgaagagaccagcaggtgtataacctcaacgttagagtcaccgaccaagttttcagcaca
gaatgtaaggtcgtcgtcaaggtcatcgacgtcaacaacgagatgcctctgttcgagaag
atggattacggcagtcacacactatcagaggacactcctgtgggacacacagtgctgagc
atcagcgcaacggacagcgatgacccagacagcggcagctcccttatcgagttccatatc
actgctggagacgacaatgaagtttttgctgtggaaaccgacggtaaaggcgtcggccat
ctggttgtagttaagcctctggactttgagtcctctgccacctacaagctccagattgac
gctcgtaacccagagccgctgatgactggtctggagtacggcagcgaatccacagccttc
gtctctgtgtctctcactgacgtagacgaggatccagagttcactctggacatcctggat
gtgactgtgcctgaaaacaccaccaagggatcagtgctgctcactgtggaggcaaaggat
ccggagggcaaagagatcagttttaagatggacggtgacactcgcggctggctggagatc
aatgctgccacaggagagatcaagaccaaagccaagctggacagagaaaccctggagact
tttgaagtcactgtcactgcgtttgagaaggagaatcccgcgaagtcgtctgagcgcgtc
gtgtctgtgaggttgctggatgtgaacgacaacgttcccaaactgatggagacccaggcc
ttcatctgtgtgaagaaacccgaacctgtcatcatcaaggcccaagacacagacagcgcc
cccttcggtcagcccttcaccttcgcgttcgcccatggcaagaaatctcccaactgggaa
ctgaaaagcattgacggtacaacagctaaactgaccctgaagaaatcaccaactgaagat
aaaaccttctcaatcccaattaatattaaagacaatgcaggcatgggagtcacacagttg
tttgaggtgagagtatgtaactgcacagagctgggttactgctacatggcaccagaagaa
cgtagcctcagttacgggatgggagccaccattgggatcctgggtggcactctgggattc
tgccttattgttttcatcatcgtgatcaaacgtgtaaataaaggaggcaataagacgacc
ctgactgaagaagaagagaggaacgccatcatgtag
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