KEGG   Anoplopoma fimbria (sablefish): 129109448
Entry
129109448         CDS       T09102                                 
Symbol
cdh17
Name
(RefSeq) cadherin-17
  KO
K06811  cadherin 17, LI cadherin
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:afb04515]
    129109448 (cdh17)
Cell adhesion molecules [BR:afb04515]
 Cadherins
  Major cadherins
   129109448 (cdh17)
SSDB
Motif
Pfam: Cadherin RET_CLD1 Cadherin_CELSR2_9th RibLong Fibulin_C
Other DBs
NCBI-GeneID: 129109448
NCBI-ProteinID: XP_054477494
LinkDB
Position
20:complement(15305587..15316801)
AA seq 871 aa
MTPMVHLLLLPLLFSIAGGKDLEEKKGPFENTELGVPEGTPVPYPMYQFQVTHPGVNSFR
LSGEGKEDIMISKDGWLYLEKPLDWSRDDHYIIMVEALADEEVVEGPVYVTINVLDINNN
APVFNQSEYTAVVRENNPAGIPFTRVFALDQDDPETPNAHLSYSLVSQIPNKHHTPLFQI
DPDTGEISTTEAGTQILKAREGIQYGKGEDQSIDALRTKFNDYCPVQNIPFEDNPFFTCV
ERAEMRRRNVDPLADPDYTLTVRVQDLGGALQTALSGNTRVHIVVQQNLWVNPGPITVKE
HLKETYPLVIAKVQSNEPNAVYTLAQKERELKFPFQITEDGEIHLTEELDREDKDMYILV
VFAVDNDDNQVDPPMEIQVLVEDVNDNAPVCANEESVFEVQEGEPVGSLIGQLLAHDDDQ
DGTLNAQLTYTIVSQNPPTSPNVFSIDDASGTIQALSSLQRRDQQVYNLNVRVTDQVFST
ECKVVVKVIDVNNEMPLFEKMDYGSHTLSEDTPVGHTVLSISATDSDDPDSGSSLIEFHI
TAGDDNEVFAVETDGKGVGHLVVVKPLDFESSATYKLQIDARNPEPLMTGLEYGSESTAF
VSVSLTDVDEDPEFTLDILDVTVPENTTKGSVLLTVEAKDPEGKEISFKMDGDTRGWLEI
NAATGEIKTKAKLDRETLETFEVTVTAFEKENPAKSSERVVSVRLLDVNDNVPKLMETQA
FICVKKPEPVIIKAQDTDSAPFGQPFTFAFAHGKKSPNWELKSIDGTTAKLTLKKSPTED
KTFSIPINIKDNAGMGVTQLFEVRVCNCTELGYCYMAPEERSLSYGMGATIGILGGTLGF
CLIVFIIVIKRVNKGGNKTTLTEEEERNAIM
NT seq 2616 nt   +upstreamnt  +downstreamnt
atgacacccatggtgcatctgttgttgctcccactcctgttcagcatcgctggtgggaag
gatctggaggaaaagaagggcccgtttgagaacacagagctaggtgtgccagaggggaca
ccagtgccatatcccatgtatcagtttcaggtgacccatccaggagttaatagtttcagg
ttgagtggagaaggtaaggaagacattatgatttcaaaggacgggtggctgtacctggag
aagcctctggactggtctcgagatgaccattacattatcatggtggaagcgctggcagat
gaggaagttgtggaaggcccagtttatgtgaccataaatgtgttggacatcaacaacaat
gctccagtcttcaaccagagcgaatacacagctgttgtcagagaaaacaatccagcgggt
atcccatttactcgggtgtttgcgttggatcaggatgacccagagactcccaacgctcat
ctgagctacagcctggtcagccagatccccaacaaacaccacaccccgctgttccagatc
gaccctgacactggagagatctccaccacagaagcagggacacagatacttaaagccaga
gaaggcatccagtatggcaaaggagaagatcagagcattgacgctctgaggacaaagttt
aacgactactgtccagtgcagaatatcccctttgaagataaccccttcttcacctgtgtg
gagagagcagaaatgaggaggagaaatgtggaccccctggcggacccagactacaccctg
actgtgcgcgtccaggacctgggaggagcattgcagaccgcgctgagtgggaacaccaga
gtgcacattgtcgtgcagcaaaacctatgggtcaatcctggacctataacagttaaagag
cacttaaaggaaacgtaccctctggtcatcgcaaaggtccagtctaatgagcccaacgcc
gtgtacacgttagcgcagaaagaacgcgagctgaaattccccttccagatcacagaagat
ggagaaatacatctgacagaggagctggacagagaagacaaagacatgtacatcctggtg
gtgtttgcagtagataatgatgacaatcaggtggatccacccatggagattcaagtcttg
gtggaggatgtgaatgacaacgcaccagtgtgtgcaaatgaggagagtgtatttgaggtg
caggagggcgagcctgtaggcagcctgattggacagctgttggcccatgatgacgatcaa
gacgggacactgaacgctcagctgacttacaccatcgtgtcccaaaatccacccacctca
cccaacgtcttctccatcgacgatgcttccggaacaatccaggcattaagctcgctgcag
cgaagagaccagcaggtgtataacctcaacgttagagtcaccgaccaagttttcagcaca
gaatgtaaggtcgtcgtcaaggtcatcgacgtcaacaacgagatgcctctgttcgagaag
atggattacggcagtcacacactatcagaggacactcctgtgggacacacagtgctgagc
atcagcgcaacggacagcgatgacccagacagcggcagctcccttatcgagttccatatc
actgctggagacgacaatgaagtttttgctgtggaaaccgacggtaaaggcgtcggccat
ctggttgtagttaagcctctggactttgagtcctctgccacctacaagctccagattgac
gctcgtaacccagagccgctgatgactggtctggagtacggcagcgaatccacagccttc
gtctctgtgtctctcactgacgtagacgaggatccagagttcactctggacatcctggat
gtgactgtgcctgaaaacaccaccaagggatcagtgctgctcactgtggaggcaaaggat
ccggagggcaaagagatcagttttaagatggacggtgacactcgcggctggctggagatc
aatgctgccacaggagagatcaagaccaaagccaagctggacagagaaaccctggagact
tttgaagtcactgtcactgcgtttgagaaggagaatcccgcgaagtcgtctgagcgcgtc
gtgtctgtgaggttgctggatgtgaacgacaacgttcccaaactgatggagacccaggcc
ttcatctgtgtgaagaaacccgaacctgtcatcatcaaggcccaagacacagacagcgcc
cccttcggtcagcccttcaccttcgcgttcgcccatggcaagaaatctcccaactgggaa
ctgaaaagcattgacggtacaacagctaaactgaccctgaagaaatcaccaactgaagat
aaaaccttctcaatcccaattaatattaaagacaatgcaggcatgggagtcacacagttg
tttgaggtgagagtatgtaactgcacagagctgggttactgctacatggcaccagaagaa
cgtagcctcagttacgggatgggagccaccattgggatcctgggtggcactctgggattc
tgccttattgttttcatcatcgtgatcaaacgtgtaaataaaggaggcaataagacgacc
ctgactgaagaagaagagaggaacgccatcatgtag

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