Anoplopoma fimbria (sablefish): 129109476
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Entry
129109476 CDS
T09102
Symbol
sema6e
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E
KO
K06842
semaphorin 6
Organism
afb
Anoplopoma fimbria (sablefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
129109476
NCBI-ProteinID:
XP_054477524
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Position
20:complement(25119193..25275688)
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AA seq
1108 aa
AA seq
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MRPMSGLPRPVLPAILALTLAAFLPRPSSGATPFPQDLEPISSVGRESSYLYPSFQGLMS
DNDTVRLGLDFQRMLRINRMLYIAARDHVFAINLATSSEQIIPQQKLTWKTKDVEKCTVR
GKNSDECYNYIKVLVPRNDETLFACGTNAFNPTCRNYKMSTLEQEGEEVVGQARCPFESR
QSNVGLFAGGDFYSATMTDFLASDAVIYRSLGESSPVLRTVKYDSKWLREPHFLHAIEYG
NYVYFFFSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDS
FFYFDVLQSLTNVLQINHRPAVLGVFTTQANSITGSAVCAFYMDDIEKAFSGKFKEQRNS
ETAWTPVPEDQVPKPRPGCCAGEGSAAAYKSSTTFPDDTLTFIKSYPLMDESVPSVNDRP
YFTRTTSRFKLTQIAVDTSAGPYKNYTVVFLGSDNGHVLKILASTEGANASFSTQLLEDI
DVYNPNKCNVRGEDRRVLGLELDRDHHALFVAFSGCVIRVPLSRCSDYSTCKKSCLSSRD
PYCIWLKSGSCATVSPGLKGGFEQDVENGYHQHAETCHDVLATTRKQNPALDLAYGKTTP
TSASTTYHGAAFPKEAGDPERGTGPDGPPPVGEQGSPDSEPISVEMEGVRRPPELEKTNH
SVHYTLLIACVLVAFVLGAFLSGFLVSCYCNHTGHKTKKLSKDPEAPIPHALSLRSLAKL
NGLLDSQSKDDKLEVSSPKIYNSFFANSKEHHQPRRNGHHAMTMGDLVHPHHHHHHHHLH
HSSELSGLPTPDSTPELPIKSMKAFKNQWEKNQNCNNAKEPKSHNTGSRPSSALLHQQVF
PYSHSLSNGQPLVGSHLHPDERKIHNVERVLSQQPYPGYSQKVMEVTSLDELLKHIHDAS
SSKSSQLMSPSGLMACGGGGQFAFANRIQPQIPETESAPYYSSSTLPRDSLTRRMDVPPD
IPPHHQSTLERRHSSQRHSLIAAATKMPNGVGCGGGVGCGGGGGGGGGGGGGGMIPRQHS
FSQRNGGPHQPPPLLARMNSTGSACEVHYPLIPNGYLTRQHSYNGDQQEVQHRGAIVRRA
SSLKPDVPPKPLFIPATSPVNQQGKFNY
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgatgtccggcctgcctcgacccgtcctgccggccatcctggctctcacctta
gccgccttcttacctcggccgtcctcgggagccacgccgttcccccaggacctggagccc
atcagcagcgtgggcagagagtcctcctacctctatcccagcttccagggactcatgtcg
gacaatgacaccgtccgcctgggcctggacttccagaggatgctgaggatcaaccgcatg
ctctacatcgctgctcgggaccatgtgtttgccatcaatcttgccacttcgtctgagcag
ataatcccacagcagaagctgacttggaagacgaaggatgtggagaagtgcaccgtgaga
gggaagaacagcgacgaatgttacaactacatcaaagtgctggtgccgcgtaacgacgag
acgcttttcgcctgcggcaccaacgccttcaaccccacctgccggaactacaagatgtcc
acactggagcaggagggggaggaggtggtgggacaggcccgctgtccctttgagtcccgc
cagtccaacgtgggcctgttcgcaggtggagacttctactcggccaccatgacggacttc
ttggcgagcgacgcggtgatttacagaagtctgggagaaagtagtcccgttctgcgcacc
gtcaagtacgactccaaatggctgcgagagccccattttctccacgccatcgagtacggg
aactacgtgtacttcttcttcagcgagatcgctgtggagtacaccacccttggcaaggtg
gttttctccagagtggcacgcgtttgtaagaacgacaacggcggctctccgagggttctg
gagcgctactggacgtcgttcctcaaagcccggctcaactgctcggtgccgggcgactcc
ttcttctacttcgacgtcctgcagtcgctgaccaacgtgctgcagatcaaccaccggccg
gccgtgctcggcgtcttcaccacgcaggccaacagcatcaccggctcggcggtctgtgcc
ttctacatggacgacatagagaaggccttcagcggcaaattcaaagagcagaggaacagt
gagacggcgtggacacctgttcccgaggatcaggtccccaagccgaggccgggatgctgc
gccggagagggctcggcggccgcctacaagtcgtccaccaccttccccgacgacaccctg
acgttcatcaagtcctacccgctgatggacgagtccgtcccctccgtcaacgacaggccc
tacttcacccgcaccaccagcagattcaagctgacccagatcgcggtggacacgtcggcc
gggccgtataagaactacaccgtggtgttcctgggctcagacaacggccatgtgctgaag
atcctggccagcaccgagggagccaacgcgtccttcagcacccaactcctggaggacatc
gacgtctacaaccccaacaagtgtaacgtgcgtggggaggacaggagggtgctgggtctg
gagctggatcgggatcaccacgccttgttcgtggcgttctccggatgtgtgatccgcgtg
ccgctgagccgctgctcggactacagcacctgcaagaaaagctgtctgtcttcacgggac
ccttactgcatctggctcaaatcaggcagctgtgccacggtctcacctggattaaaaggc
ggctttgaacaggatgtggagaacggttaccatcagcatgctgaaacctgccacgatgtc
ctggcgaccactcgcaagcaaaacccggcgctggatttggcgtacgggaagaccacaccc
acaagcgccagcacaacctatcatggggcggcgttcccaaaggaggcaggtgaccctgaa
agaggtacaggtcctgatggccctccccccgttggggagcaagggtcacctgactcggag
ccaatcagtgtggagatggagggtgtgaggcggccgccagagctggagaagaccaatcac
agtgtccattacactctcctgatcgcttgtgttttggtggcattcgtccttggcgccttc
ctctctggcttcctggtctcctgctactgtaaccacacgggccacaagacaaagaagttg
tccaaagatcccgaggcgccgatcccacacgccctgtccctccgcagcctggccaagctc
aacggcctcctggacagccagagtaaagacgacaagctggaggtgtcctctccaaagatc
tacaactctttcttcgccaacagcaaggagcatcaccaaccaaggagaaacgggcatcac
gcaatgacaatgggagacctggtccaccctcaccaccaccaccaccaccaccacctccac
cattcctcagagctctctggtctgcctacaccagactcgacccctgaactgccaatcaag
agcatgaaagccttcaagaaccagtgggagaagaaccagaattgcaacaatgccaaggaa
ccaaagtcccacaacactggctccaggcccagctcagccctgcttcaccagcaggttttc
ccgtactcccatagcctgtccaatgggcagccattagtcggaagtcatctccatcctgac
gaacgcaaaatccacaatgttgaacgtgtgctatctcagcaaccttatcctggctactcc
cagaaggtgatggaggtgacctcactggatgagctcctgaagcacatccacgatgcaagc
agcagcaagagctcccagttgatgagcccgtcgggtctgatggcgtgcggtggcggcggt
cagtttgcattcgccaaccgcatccaacctcagattcctgagacagaatcagccccctac
tacagctcgtccactttacctcgagacagcctcacccgacgcatggatgttcctccggac
atccccccacaccaccagtccaccctggagaggaggcactcctcccagaggcactcgctg
attgctgcagccaccaagatgccaaacggagtaggatgtggaggtggagtaggatgtgga
ggtggaggaggagggggaggaggaggaggaggaggaggaatgataccccgccagcacagc
ttcagccaacgaaacggcgggccccaccagccgcctcccctcctggcacggatgaactcg
acaggcagcgcctgcgaggtgcactaccccctcatccccaacgggtacctgacacgccaa
cacagctacaatggagatcagcaggaggtccaacacaggggcgccatcgtccgccgggcc
tcctctctcaaacccgacgtcccacccaagcccctgttcatacccgccacgtcccccgtc
aaccaacagggaaagttcaactactga
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