Anoplopoma fimbria (sablefish): 129109484
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Entry
129109484 CDS
T09102
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129109484 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129109484 (prpf31)
Spliceosome [BR:
afb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
129109484 (prpf31)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
129109484
NCBI-ProteinID:
XP_054477535
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All DBs
Position
20:complement(16825979..16831330)
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AA seq
508 aa
AA seq
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MSLADELLADLEEAGDEGDDGLYPDEEEGESDGEETQGKTEGGLEDIPEEMEVDYSKAES
VASIAKLRNSKQFSEIMDKISMYSGKQRKNLEDSGPVESDPEYRLIVAANNLTVEIDNEL
NIIHKFTRDKYSKRFPELESLVPDSLDYIRTVKELGNNLEKCKNNENLQQILTNATIMVV
SVTASTTQGSLLSDDELKQLEEACDMALELNQSKHRIYEYVESKMSFIAPNLSIIVGAST
AAKIMGIAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDL
RRKAARLVSAKCTLAARVDSFHESSVGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPL
DGQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRV
RQAQVNDATKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQA
AEKKVAEANQKYFSNMAEFLKVKKEAKM
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcggacgagctcctggccgatttggaggaggccggagatgagggggatgat
gggttgtatccagatgaagaggagggggaaagtgatggagaagaaacacagggaaagaca
gaaggagggttggaggacatcccagaggagatggaggtggactacagcaaagctgagagt
gttgcgtccatcgctaagctccgcaatagcaaacagttttcagagattatggacaaaatt
tccatgtatagcggaaagcagcgcaagaacttagaggactcaggtcctgtcgagtccgac
ccagaatacagactgattgtcgcagccaataacctcacagtggagatcgacaatgagctc
aatatcattcacaagtttacccgggacaagtactccaagaggtttccagagctcgagtct
ctggtgccagattctctagattacatccgcacagtcaaggaattgggaaacaatctagag
aaatgcaagaacaatgaaaatctccagcaaatcctcaccaatgccaccattatggttgtc
agtgtcacagcctcgaccacacaggggtcactgctaagtgacgatgaactgaagcaacta
gaggaggcgtgtgacatggctctggagttgaaccagtctaaacacaggatctatgaatac
gtggagtccaagatgtcattcattgccccaaatctgtccatcattgtgggagcttcaaca
gctgccaagatcatgggtatcgccggcggcctcactaacctctctaagatgcccgcctgt
aacctgatgctgttgggagctcagaggagaaccttgtctggctttagcagcacctccctg
ctgccccacaccggctacatctaccactgtgatgttgtgcagtcactaccacctgacctc
aggaggaaggcagctcgtctggtgtctgcaaaatgcactctggctgcccgagtggacagt
ttccatgagagttcagttggcaaggttggctacgatctaaaagaagaaatagagaggaag
ttcgataaatggcaggagcctccgccagtgaagcaggtcaaaccactgccagcccctctg
gatggacagaggaagaagagaggaggaaggaggtatcgaaagatgaaggagcgtctggga
ctgactgagatccggaaacatgccaacagaatgacctttgcagagattgaagacgatgcg
tatcaggaggatctgggcttcagtcttggtcagctgggaaagagtggtagcggtcgtgtc
cggcaggctcaagtcaatgacgccaccaaggccagaatctccaaatccttacagaggacc
ttgcagaagcagagcatgacgtacggaggaaagtccacagtcagagaccgctcctcagga
accagctccagtgtggcgttcactccccttcagggcttggagatagtgaacccacaggct
gcagaaaagaaggtggctgaagccaaccagaagtacttctccaacatggcggagttcctc
aaagtcaagaaagaagctaagatgtga
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