Anoplopoma fimbria (sablefish): 129109508
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Entry
129109508 CDS
T09102
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
afb01002
]
129109508 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129109508 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129109508 (usp5)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129109508 (usp5)
Peptidases and inhibitors [BR:
afb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129109508 (usp5)
Ubiquitin system [BR:
afb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129109508 (usp5)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129109508 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
129109508
NCBI-ProteinID:
XP_054477564
LinkDB
All DBs
Position
20:17962013..17974666
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AA seq
829 aa
AA seq
DB search
MAEVGDVLMSVLSTIRVPKPGDGVHKDECALSFSSPESEGGLFVCMNSFLGFGSQYVDRY
HARTGQRAYLHITRTRKDKKEDDNNSGSGHPPKKKPTRLAIGIEGGFDVEQEQYEEDIKV
VILPDRQEVTSEDVATMPEFVRERVSLSMAGIMAADSVSHALQVQQWDGEVRQESRHAAG
LKQLDNGVKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGTGGNNHALLHFQETGY
PIAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLAHFGINMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPMFGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQNKYVSNIDKII
DEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPADENGASEPRGDQIGIAPRMFKALVG
RGHAEFSTNRQQDAHEFLLYFINMLERNCRSGSNPSEAFRFLVEERIVCQQTQKAKYTQR
VDYIVQLPVPMDQATNTEELQEAERRREEGDSSAPTVRAQIPFTACMAALSEPEILTDFW
SSAVQSKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSALRATG
QQPGEELLPEVAPPPLMTPDVEVKAPVIDETTVALLCDMGFPPDACRKAVYYTGNTGIEN
VMDWIMSHKDDPDFAAPLVLPGCSSGPGTTPTESISEEHLATIVSMGFSRDQATKALRAT
SNVLDRAVDWIFSHLDDLESMDVSEGGRSAAESEGDRDLPPGPRVKDGPGKYELFAFISH
MGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYLYFYQRVAE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtcggtgatgttttgatgtcggtgttatccacaatccgggtcccgaagccc
ggggacggggtccacaaagacgaatgcgccttgtcattttcctcgccggaaagtgaagga
ggactgtttgtgtgcatgaacagcttccttggctttgggagtcagtatgtggaccggtac
cacgcccggaccggccagagggcttacctacacataacccggactcgcaaggataagaag
gaagatgacaataactctggatctggtcacccgccaaagaaaaagcccaccagattggct
ataggaattgaaggagggtttgatgtggagcaggagcagtatgaagaggatataaaggtg
gtcattttacctgatagacaggaagtgacatcagaggacgttgctaccatgcctgaattt
gtgagagagcgggtgtccctgtcaatggcgggtataatggcagccgactcagtgtctcat
gccttacaagttcaacagtgggatggagaggtgagacaggagtcgaggcatgctgctggc
cttaaacagcttgacaacggagtcaagatccctcccagtggctggcggtgtgaggtgtgt
gacctccaggagaatatttggatgaacctgacagacggcaaagtgctgtgtggtcgcagg
tattttgatggcaccgggggcaacaaccatgcccttctacacttccaggagacaggatac
ccaattgctgtcaaacttggtaccatcactcctgatggggcagatgtgtattcctatgat
gaggatgacatggtactggattccaagttaccagagcatctggctcactttggcatcaac
atgatgaccatggagaagaccgaacggacaatgacagagctggagattgctgtgaaccag
cgtgtgggggagtgggaggtgatccaggagtcgggcaccaccctacggcccatgtttgga
cccggtttgactggcatgaagaatctagggaacagttgctacctcaactctgtcatgcaa
gtgctcttcaccgttccagatttccagaacaaatatgtgtctaacatcgacaagattatt
gatgaagccccaagtgaccccacccaggactttaaaacccaagtagccaagctcggctac
ggtctgttgtcaggagagtattccaaaccagcgccagaccctgcggatgaaaatggtgca
tctgaacccaggggagaccaaatcggtatagcgccaagaatgttcaaagcacttgttggg
cggggccacgcagagttctctacaaatcgacaacaggatgctcatgagtttttattgtac
ttcataaacatgttggagaggaactgtcgctctgggtccaacccatctgaagccttcagg
ttcctggtggaggagaggattgtgtgtcagcaaacacagaaagccaagtacacgcagcgg
gtggattacatcgtccagctgcctgtgccgatggatcaggctaccaacacagaagagctt
caggaggcggagcgccggcgtgaggagggggactcatcagcccccacagtgcgtgcacaa
atccccttcacagcttgcatggcagccctcagtgaaccagagatcctcacagacttctgg
agctcggctgtgcagtccaagactactgctaccaaaacaacgcgctttgcctcttttccc
gaccacctggtcatccagattaagaagttcacctttggcctcgactgggtgcccaagaaa
ctggacgtgagcattgacgttcctgacaccctggacctgagcgccttacgtgcaactggc
cagcagccaggggaggagcttctaccagaggtggccccgcccccactcatgaccccagat
gtggaggttaaagctccagtcattgatgaaaccactgtggccctgttatgtgacatggga
ttcccaccggacgcctgcagaaaagcggtgtactacactgggaacactggaatcgaaaat
gtcatggattggatcatgagccataaggatgacccagactttgcggcccccctggtgttg
ccaggctgtagctccggccccgggaccacacccacagagagcatctccgaggagcacctg
gcaaccatcgtctccatgggcttcagccgagaccaggcaaccaaagctcttcgagccacg
agtaatgtcctggaccgggccgtggactggatcttctcccacctggatgacctggagtcc
atggatgtttctgaaggcggtcgctcagccgcagagagcgagggtgacagagatcttccg
cctgggcctcgtgtcaaagacggaccaggaaagtatgagctgtttgcgttcatcagtcac
atggggacgagcacaatgtgcggccactacgtctgtcacatcaagaaggatcagcagtgg
gtcatcttcaatgatcagaaggtctgcgcttcagagaaacctcccaaagacctgggatac
ctctacttctaccagagagtggctgaatga
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