Anoplopoma fimbria (sablefish): 129109512
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Entry
129109512 CDS
T09102
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afb03009
]
129109512 (nop2)
Enzymes [BR:
afb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
129109512 (nop2)
Ribosome biogenesis [BR:
afb03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
129109512 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
TRM5-TYW2_MTfase
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
129109512
NCBI-ProteinID:
XP_054477570
LinkDB
All DBs
Position
20:17633112..17639732
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AA seq
764 aa
AA seq
DB search
MGRKLDPTNKVKRGPGRKSRKQKGAETELAKFIPDEETAPKRLSSRSRKRATKRVQNLKK
PKDAAVEKPKKGFTDENSKWLTPAKRKRKIDEAESDDDSDEHWEEDEEEEEEQPKPTKKG
GKDQGKKGAKLEIKEAKEGEEEEDEDDDDDDDEMVDDYGALDEGSGEEAAEEESDEEELL
PIELAAKKAKKLKETMGLDSDDDDDDDDDDEDDKGEEAKKSDADTDEEDTVQANMDEMDA
FRLPGAEESQKEGILPLDLKSIYQRIKDNIDVLCNFSTKREEGKERAEYISLLKKDLCTY
YSYNNFLLDKLMDLFPLSELVDFLEANEIQRPVTIRTNTLKTRRRDLAQALINRGVNLDP
LGKWSKVGLVIYDSSVPVGATPEYLSGQYMLQGASSLLPVMALSPQEGELVLDMSSAPGG
KTTYIAQLMRNTGMIVANDANADRLKSVVGNIHRLGVTNTVICNYDGRHFPKVMSGFDRV
LLDAPCSGTGVIAKDPAVKTSKDEADIQRSAHLQKELILSAIDSVNAESSSGGYLVYCTC
SIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTRFKERRFHPTLRLSRRFYPHSHNMD
GFFVAKLKKFSNVIPTAAAGKEEENTDAPDATAVTDSPEEKPSKSDKKKKIVPGKAGGLK
GKPQANGTAAKKTTKPKGKKGSPAGPKKAKIARMDGETVKGAQAKKPAAKTADDPKASKA
DKKEGSRFEKKQGKKIKTPIKAKDRMGKNKFRKLKNMLEKPDGE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtaagttggatcccaccaacaaggtgaagagaggaccagggagaaaatccagg
aagcagaaaggagcagagaccgagttggccaagtttatacctgatgaggaaaccgcacca
aaacgcctgtcaagtagaagcaggaaaagagctacaaaaagagtccagaacttgaaaaag
cctaaagatgctgctgtggaaaaacccaagaaaggattcactgatgagaacagcaaatgg
ttgacaccagcaaagagaaagcgaaaaattgatgaagctgaaagtgatgatgacagtgat
gaacactgggaggaagatgaggaggaagaggaggagcagccgaaaccgacgaagaaggga
ggaaaggaccaaggaaagaagggagccaaattagaaattaaagaagcgaaggagggagag
gaggaggaggatgaagatgatgacgatgatgatgatgaaatggttgacgactacggtgca
ctggatgagggcagtggtgaggaagcagcggaagaagaaagtgatgaagaggagcttctt
cccattgagcttgcagccaagaaagcaaaaaagctgaaggaaaccatgggtctcgatagt
gatgatgatgatgatgatgatgatgatgatgaagacgacaagggtgaagaggcaaagaaa
tcggatgctgacacagatgaggaagacacagtacaagccaacatggatgaaatggatgca
ttcaggctacctggtgccgaggaaagtcagaaggaaggcatccttcccctggacctgaag
agtatctatcaaagaattaaggacaacattgatgtcctgtgtaatttctcaacaaaaaga
gaggaggggaaagagagagcagagtacatctctcttctgaagaaggatctctgtacttat
tacagctacaacaacttcctccttgacaagttaatggacctcttccctctctcagagctg
gttgatttccttgaggccaatgaaattcagagacctgtcactattcggaccaacacattg
aaaacaaggaggagggatcttgcccaggccttgatcaacagaggagtgaaccttgatcca
ctgggaaaatggtctaaagtgggtttggtcatctacgactcctcagtacctgttggtgca
accccggagtatctgtctggtcagtacatgctgcaaggagcctccagtttgctacccgtc
atggcgctctctccacaggagggggagttagtgttggacatgagctcagctccaggaggc
aagaccacctatattgctcagctgatgagaaacacggggatgatcgtggctaatgacgcc
aacgctgacagattgaagagtgttgtgggcaacatccaccgtctgggggtcaccaacacc
gtcatctgcaactatgacggaaggcatttcccaaaggtgatgagtgggtttgacagagtg
ctgcttgatgctccgtgctcaggcacaggagtcatcgctaaagatccagctgtgaagacc
agcaaggacgaggccgacatccagcgatctgctcacttgcagaaagaactgattctgtcg
gccatcgactctgtcaatgctgagtcctcttcaggaggatatctggtctactgcacatgt
tcaataatggtggaggagaatgaatgggtggtggactacgctttaaagaaaagaaatgtc
aaattagttcccactggacttgactttggcaaggaaggcttcaccaggttcaaagaacgt
agattccatcctactctgcgactgtctcgccggttttaccctcattcccacaatatggat
gggttttttgtggccaagctgaaaaaattctccaatgtaattccaactgcggctgcagga
aaagaagaagaaaatacagatgctcctgatgcaacagctgtgacagactctcctgaagag
aaaccatccaaaagtgataagaaaaagaagattgtccccggaaaggcaggtggcttaaaa
ggaaaaccccaagccaatggaacagcagccaagaaaaccaccaagccaaaaggcaaaaag
ggctcacctgctggaccaaaaaaggcaaagattgccaggatggatggagagactgtaaaa
ggggcacaggccaagaagcctgcagcgaagacagccgatgaccccaaagcatcaaaggct
gacaaaaaggaggggagcagatttgagaagaagcagggcaaaaagatcaaaacacccata
aaggcaaaggacagaatgggaaagaataaattcagaaaactgaagaacatgttggaaaaa
ccagacggagaatga
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