Anoplopoma fimbria (sablefish): 129109515
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Entry
129109515 CDS
T09102
Symbol
pou2f2a
Name
(RefSeq) LOW QUALITY PROTEIN: POU domain, class 2, transcription factor 2
KO
K09364
POU domain transcription factor, class 2
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129109515 (pou2f2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129109515 (pou2f2a)
03021 Transcription machinery [BR:
afb03021
]
129109515 (pou2f2a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
129109515 (pou2f2a)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
129109515 (pou2f2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
129109515
NCBI-ProteinID:
XP_054477573
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All DBs
Position
20:18387215..18401214
Genome browser
AA seq
714 aa
AA seq
DB search
MTKTAAIAAKDFFSMWLPDIRMSKPVEVDKVGAESPLEGTDSERNGPESNHQAQSMKVNP
FPLSPNLGSSKNKMEECGEMSPALPLSHGPTPSQTALQHTQLMLTGSQLAGLTALLPAQQ
QLLLQQAQAQLLAAAVQQSSAAHAAHAAHAAAQASASSGSSSSSSKSASPAASQSQGQGQ
STQDQAASVPPPPPQLTLSQPIQLTAQDIQQLLQLQQLVLVPGHSLPSPAQFLLPQAQQG
QQGLLSTPNLISLPQQNQGSLLSASTRMGLQAHVXGNSETLRDKSLEVSGVPTVNSVTSH
PEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKN
MCKLKPLLEKWLIDAETMSIDCTLPSPSSLSSSSMGFDGVPGRRRKKRTSIETNVRVALE
RAFMTNQKPTSEEILLIADQLNMEKEVIRVWFCNRRQKEKRINPSSATPPLPSQPTAPPS
HKQPCYSPHMMSSQLSQAVTSLSTTVTTMSPVCPLTSSLTSTHPSLSSAPSPVTPPPPPR
STASPATPSHSTLNLNTGLWRMGKKNGDVSNYLTDFAANLRNTVMGVNTGMNQALLGNNP
LATLQALAASGGQLPLSSLEGASKMMLGASGGHGGCLPSSLFLNHPAFLHMGQNPSAGLI
SAAVAKASQASPFPSASSISPTPCSPSPCSSPASSCSSSEMAHSPSSLGGAKIE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagacagcagcaatagcagcaaaggacttcttcagtatgtggttgccagatatc
aggatgtcaaagccagtagaggtcgacaaagtaggggcggaatcaccgttggagggcaca
gattcagagcggaatggacctgaatcaaatcaccaggctcagtcaatgaaagtcaatccc
tttcccctttcaccaaacctgggcagcagcaagaataagatggaggagtgtggtgagatg
tccccggctcttcctctctctcacgggccgaccccatcgcagacggccctgcaacacaca
cagctcatgctgaccggctcccaactggcagggttgacagctctgttgccagcacagcag
caactgttgctgcagcaggctcaggctcagctcctggctgcagctgtgcagcagtccagt
gcagcccatgccgctcatgctgcccacgcagccgcccaagcctcagcaagctcaggcagc
agcagcagcagcagcaaatcagcaagcccagcagcatctcagtcccagggacagggacag
agcacacaggatcaggcagcctctgtcccgcctcctccaccccagctcaccctctcccag
ccaatccagctcaccgcccaggacatccagcagctgctgcagctccagcagttggtgttg
gtgcccggccactcgctcccgtccccggcccagttcctcctcccacaggcgcagcagggc
cagcaaggactcttatcgacaccaaatctaatttcgctacctcagcaaaaccaagggagc
ctgctgtctgcttcaactagaatgggactccaagcacatgtatgaggaaactctgaaact
ttacgagataaaagtctggaggtgagcggcgtgcccacggtgaactcggtgacctctcac
cccgaggagccaagtgacctggaggagctggaacagtttgcccgcactttcaaacagaga
cgcatcaaactgggcttcacacagggagatgtcggtttggccatggggaagctgtatggc
aacgacttcagtcagaccacaatctctcgctttgaagccctcaacctgagctttaagaac
atgtgcaagctgaagccgctgctggagaagtggctcattgatgcagagaccatgtccata
gactgcaccctgcccagccccagctccctgtcctcttcctctatgggctttgacggggtt
cctggtcgccgcagaaagaagagaaccagcatcgagacaaatgtacgcgtggccctggaa
cgcgcattcatgacgaaccagaagcctacctcagaggagatcctgctgatcgcagatcag
ctcaacatggaaaaggaggtgatccgggtctggttctgcaaccgccggcagaaagagaaa
cgcatcaatccctccagtgccacccctcccctgcccagccagcccactgccccaccatcg
cacaaacagccctgctacagccctcacatgatgtccagccagctgtcgcaggccgtgacc
agtctcagcacaacggtgaccaccatgtcccccgtctgccccctgacttccagcctcacc
tccacccacccctccctcagctctgcaccctccccggtgactcctcctcctcctccccgc
agcacggccagcccagccactcccagccacagcacactcaaccttaacacaggtttatgg
cgtatgggtaaaaagaacggtgacgtgtctaactacctcaccgattttgctgcaaacttg
aggaacactgtgatgggagttaacacagggatgaaccaagccctcctcggtaacaatccc
ctcgccactctccaagccctagcagccagtggtggccagctgcctctttccagtcttgag
ggggccagtaagatgatgctgggggcctctgggggccatggagggtgcctcccttcctcc
ctcttcctcaaccaccccgccttcctccacatgggccagaaccccagcgctggactgatc
agcgctgccgtagccaaagcctcccaggcctccccctttccctctgccagcagcattagc
cccaccccctgctccccctccccctgctccagccccgcctcttcctgctcctccagcgaa
atggcacacagcccgtcctctctgggcggggccaagattgagtga
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