Anoplopoma fimbria (sablefish): 129109682
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Entry
129109682 CDS
T09102
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129109682 (cdkal1)
Enzymes [BR:
afb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
129109682 (cdkal1)
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
129109682 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
129109682
NCBI-ProteinID:
XP_054477774
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All DBs
Position
20:3607245..3826361
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AA seq
565 aa
AA seq
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MPSACDSLIDDIEDMVSSSDPTPHERQSARKSIMPRSRKKKDLLSHEELQADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPSDADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVLAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKERVPGVTIATDLICG
FPGETEKDFQETVDLVKLYQFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDAQYYVSHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLKGRPVEESKPFTPSIAKPLQKGEVSGLMQKQIANGIQDPASSMPSSSVVLIGSYSLDR
EVLKKLGIGLTLAAAILAFIIEKLY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccgcctgtgactctctgattgacgacattgaggacatggtgtcctctagcgac
cctactcctcacgagagacagtctgctagaaagagcatcatgccaaggtccaggaagaaa
aaagaccttctgagccacgaggagctccaagctgacagtttgatccctggcacccagaaa
atctggatgaaaacgtggggctgcagtcataacaactcagatggagagtacatggccgga
cagctagctgccagcggatacaagatgactgatgacccatcagacgcagacctctgggtt
ctcaacagctgcactgtgaagaaccctgcagaggaccacttcagaaactcaatcaaaaaa
gcccaggaacagcagaaaaaagtggtattagcaggttgtgttccccaggctcagccacgg
atggactacctcaaaggactcagcatcattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggccactcagttcgtcttttgggtcagaagaaagatgga
ggccggaggctcgggggagctagactggacctgcccaagatcaggaagaatcctctcatt
gaaatcatctccattaacactgggtgtctgaatgcatgtacatactgtaagactaagcat
gccagaggagacctagccagctatccaatcgaggagctagtggagagagccaggcagtct
ttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggagcgtatggcaga
gacatagggacagacctgcccacattgctgtggagattggtggaggagattcctgaagga
gccatgctgaggttgggtatgaccaacccaccatatatcctggaacacctggaggagatg
gctaagatattgaatcatccgcgcgtctatgccttccttcatgttcctgtgcaatcagcc
tcagacagcgtcctgatggacatgaagagagagtattgcatcgatgacttcaaaaaagtg
gtggacttcctcaaagagagggtcccaggtgtaaccattgctacagatttaatctgcggt
tttcctggtgagacggagaaagacttccaagagacagtcgacttggtgaaactctatcaa
ttccccagtctcttcataaaccagttctaccccagacccggtacacctgctgccaagatg
gagcaagtaccagcacatgtgaagaagcagaggactaaagagctgtcacaactattccac
tcttacaacccctatgaccacaaggtcggggagaggcagcatgtgttggtgacggaggag
tcatttgatgctcaatactatgtgtctcacaacaagttctacgaacaggtgctggtgcct
aagagggctgagttcaaagggaagatgattgaggtggacatctacgaggcaggaaaacac
ttcctgaaaggccgaccagtagaggagagtaagccattcactccttccattgccaaacca
cttcagaagggagaagtgtctggcctgatgcagaaacagattgccaatggcatccaagat
cctgcttcatctatgccttcttcatctgttgtgttgatcggctcttacagtctggacagg
gaagtactgaagaagctgggaatcgggctcactctggcagcagccatcttggccttcatc
attgagaaactgtactga
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