Anoplopoma fimbria (sablefish): 129109687
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Entry
129109687 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF19A-like
KO
K11972
E3 ubiquitin-protein ligase RNF19A [EC:
2.3.2.31
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129109687
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129109687
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129109687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
zf-C3HC4
IBR_2
Motif
Other DBs
NCBI-GeneID:
129109687
NCBI-ProteinID:
XP_054477779
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All DBs
Position
20:11474812..11503229
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AA seq
937 aa
AA seq
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MRGTGYPAPAPRWHTPPLPLEMSLQKHRQLGGGVMGSDRDLQSTASSISLPSVKKAPKKR
RLSLASLFRRRGRESKSARQRSRELQHPGPLGLGGVDGIASIESIHSEMCNDKNSAFFSV
AGTGAASAAAAAAAAAAAAAAAAAACSAAAAAAAASTSSASGPSSSTSYTTSSSTAGSGV
GAELLECPLCLLRHSRESFPDIMTCHHRSCIDCLRQYLRIEISESRVNISCPECSERFNP
HDIAMILGDRALMEKYEEFMLRRWLVADPDCRWCPAPDCGFAVIAFGCASCPKITCGREG
CGTEFCYHCKQLWHPNQTCDAARQQRAQSLRLRTVRSSSLSYSQESGAAADDIKPCPRCA
AYIIKMNDGSCNHMTCAVCGCEFCWLCMKEISDLHYLSPSGCTFWGKKPWSRKKKILWQL
GTLVGAPVGIALIAGIAIPAMIIGIPVYVGRKIHNRYEGKDISNHKRNLVIAGGVTLSVI
VSPVVAAVTVGIGVPIMLAYVYGVVPISLCRSGGCGVSAGNGKGVRIEFDDENDMNVGSG
AAATDTTSVADARNNPSIGEGSVGGLTGSLSASGSHMDRLGAIRDNLSETASTMALAGAS
ITGSLSGSAMVNYLNRLEVQADVQKERCSLSGESGTVSLGTISDNASTKAMAGSILNAYM
PLDRDGNSMEVQVDIESKPGKLRHHSGSSSVDDGGAHAGRCGWTCPSGGCPSGGCASSEG
KGASGRWAKEACCSSSCSXGGKKSKGKLRKKGGGGTKINESREDMDAQLLEQRSTNSSEF
DSPSLSGSLPSVADSHSSHFSEFSCSDLESMKTSCSHGSGGGDYHTRFATVSPLPEVEND
RLETCPGSSSASSQGHGAVVAPHSPTSTTSSLGHGAELSPLCFITAENVNLVCPAELDSH
SNARELLKETNNNHHQPPHPTQTQQQQPKNSCIQTDI
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggacaggctacccagctccggctccccgctggcacacccctcccctcccccta
gagatgagcctgcagaaacaccggcagttgggcggcggggtgatgggctccgaccgggac
ctgcagtccacggcatcttccatctccctgccctctgtgaagaaggccccgaagaagagg
cgcctctccctggcctctcttttcagacgacgtggtcgagagtccaaatcggcgcgccaa
aggtccagagagctccagcacccgggacccttggggcttggaggggtggatggcatcgcc
agcatcgagagcatccactccgagatgtgtaacgacaagaactctgccttcttctctgtg
gccgggaccggagctgcctctgctgctgctgctgctgctgctgctgctgctgctgctgct
gctgctgctgctgcttgctccgctgctgctgctgctgctgctgcctccacctcatctgcc
tcagggccttcctcctccacctcctacaccacctcctcctccacggcggggagcggggtg
ggggcagagctgctggagtgcccgctgtgccttctgcgccactccagggaaagcttcccc
gacatcatgacctgtcaccaccgctcctgcatcgactgcctgcgccagtacctgcgcatc
gagatctcggagtcgcgcgtcaacatcagctgccccgagtgctcggagcgcttcaacccg
cacgacatcgccatgatcctgggggaccgggccctcatggagaagtacgaggagttcatg
ttgaggaggtggcttgtggccgaccccgactgccgctggtgccccgcgccggactgtggg
tttgccgtgatcgccttcgggtgcgccagctgtcccaagatcacgtgcggcagggagggc
tgtggtacagagttctgttaccactgcaagcagctgtggcaccccaaccagacctgtgac
gccgcacggcagcagagagcccagagcctccgcctgaggacggtccgctcgtcctccctc
agctacagccaggagagcggcgctgcagccgacgacattaagccatgtccgcgctgcgcc
gcttacatcatcaagatgaacgacggcagctgtaaccacatgacctgcgccgtctgcggc
tgcgagttctgctggctctgcatgaaggagatctcggacctgcactacctgagtccgtca
ggctgtactttctgggggaagaagccatggagcaggaagaagaagatcctttggcaactg
gggacactggtgggcgcccccgtcggcatcgcactcatcgcaggcatagccatccccgcc
atgatcatcggcatccccgtatatgtggggaggaagatccataaccgctatgaaggcaaa
gatatctccaaccacaagaggaacctggtgatcgctggaggagtgaccctctctgtcatt
gtgtctccggtggtggctgcagtcacagtcggcatcggagttcccatcatgctggcttac
gtctacggcgtggtgcccatctcgctgtgccgtagcggaggctgcggtgtctcagctggg
aacggaaaaggggtccgcatagagttcgacgacgagaacgacatgaatgtcggcagcggt
gcggctgccaccgataccacgtcagtagcagacgccaggaacaaccccagtataggtgaa
ggaagcgtgggggggctgacgggcagtctgagtgccagcggcagccacatggaccgtctg
ggggccatcagggacaacctgagcgagacggcgtccaccatggccctggccggggccagc
atcaccggcagcctctccggcagcgccatggtcaactacttaaacaggctggaggtgcag
gctgacgtgcagaaggagcgctgcagtctgagcggcgagtctggaaccgtcagcctgggc
acaatcagcgacaacgcaagcaccaaagcaatggctggatccattcttaacgcctacatg
cccctcgacagagatgggaacagtatggaggtccaggttgacattgaatccaaacctggc
aaactgcggcaccatagcggcagcagcagcgttgacgacggcggcgcccacgcgggccgc
tgcggctggacctgcccctccggcggctgcccctccggtggctgcgcctcctcggagggc
aagggagcctccggcaggtgggccaaagaggcgtgctgctcctcctcctgcagcntcggg
ggcaaaaagagcaaaggcaagctgcgcaagaagggcggcgggggcaccaagatcaacgag
agccgcgaggacatggacgcccagctgctggagcagcgcagtaccaactcctcggagttc
gactccccgtcgctgagcggcagcctgccgtccgtggccgactcccactccagccacttc
tccgagttcagctgctccgacctggagagcatgaagacttcctgcagccacggctccggc
ggtggtgactaccacacgcgcttcgccaccgtcagccccttgcccgaggtggagaatgac
cgcctggagacctgccccggctcctcctcggcctcctcgcagggacacggggctgtcgtc
gccccccactcccctacctccaccacctcctccctgggccacggcgcggagctctcccct
ctctgcttcatcacggcggagaacgtcaacctggtgtgccccgctgagctggactctcac
agcaacgccagagagctgctaaaagaaaccaacaacaaccaccaccaaccaccacacccc
acccaaacccagcagcagcagcccaagaactcctgcatacagactgacatctga
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