Anoplopoma fimbria (sablefish): 129109736
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Entry
129109736 CDS
T09102
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00900
Terpenoid backbone biosynthesis
afb01100
Metabolic pathways
Module
afb_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
129109736 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
afb01006
]
129109736 (fdps)
Enzymes [BR:
afb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
129109736 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
129109736 (fdps)
Prenyltransferases [BR:
afb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
129109736 (fdps)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
DUF7083
Motif
Other DBs
NCBI-GeneID:
129109736
NCBI-ProteinID:
XP_054477833
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All DBs
Position
20:16273054..16277635
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AA seq
398 aa
AA seq
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MRRLLSLVTKAPKAVRAMLHAVSPLTLKTSSVLLCTSSFQGDSTCNGTHSNKKALLSDPQ
MFEAQFDELVTELTERDLADPVLADALSRFKEVLVYNSPGGKRNRGLSVIASLRDLLAPT
QLTQDTVRRALLVGWCIELLQGFFLVADDIMDGSVTRRGQPCWYKKDGIGLDAINDSFLL
EAAIYRLLRRHCRDQPYYVHLLELFTETSFQTELGQALDLMTSTPGQIDLNRFSLERYKA
IVKYKTAFYSFYLPVAAAMYIAGIESEEEHNNAKLILLEMGEFFQIQDDYLDCYGDPAVT
GKIGTDIQDNKCSWLVVTALETMTPEQRAELKACYGRHDDACVEKVKALYNTLQMPTLYQ
KYEEESYQRLQKLIASHAQNLPHSIFLNFAKKIYKRNK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtctgctgagcttggtcactaaagcgcccaaagcagtccgggccatgctgcac
gccgtgtccccgcttactttaaaaacatcgtctgttctgctgtgcacctcgtccttccag
ggggacagcacttgcaacgggacgcacagcaacaaaaaggcgctgctgtccgaccctcag
atgtttgaagcccagtttgacgagctggtgacggagctgacagagagggacctcgctgac
ccggtgctggctgatgctctgagcaggtttaaagaggtattggtgtacaattcccctgga
ggcaagaggaaccgggggctgtcagtgattgcgtcactgagggatcttctcgctcccact
cagctcacacaggacacagtgcggcgggctctgttggttggctggtgcattgagttgctt
cagggattttttctggtggcagatgacatcatggatggatctgtgactcggagaggacag
ccctgctggtacaagaaggatggaatcggtctggatgccatcaatgattcatttctctta
gaggctgccatctacagactgcttcggagacattgcagggatcagccgtactacgtccac
ctactggagctatttactgagacatctttccagacggagctcggccaagctctggacctc
atgacatccacccctggtcagattgacctcaacagattctccctggagaggtataaagct
attgtaaaatacaagactgcattttactctttttacctcccagtggcagctgcaatgtat
attgcaggaattgagagtgaagaggaacacaataatgccaaactaatcttacttgagatg
ggagagttctttcaaatacaggatgactacttggactgttacggagaccctgctgtgaca
ggaaagattggcacagacatccaggataacaaatgtagctggctggtggtgacggcgctg
gaaaccatgacacctgaacaaagagcagagctgaaggcatgttatgggcgccatgatgat
gcctgtgtagaaaaggtcaaagcactgtacaacaccctacaaatgccaacgctgtaccaa
aaatatgaggaagaaagctaccagcggttgcagaaactcattgctagtcacgctcaaaac
cttcctcactcaatcttcctcaacttcgccaagaaaatctacaagaggaacaagtga
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