Anoplopoma fimbria (sablefish): 129109836
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Entry
129109836 CDS
T09102
Symbol
gdf6a
Name
(RefSeq) LOW QUALITY PROTEIN: growth/differentiation factor 6-A
KO
K20012
growth differentiation factor 6
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04060
Cytokine-cytokine receptor interaction
afb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129109836 (gdf6a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129109836 (gdf6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
afb04052
]
129109836 (gdf6a)
Cytokines and neuropeptides [BR:
afb04052
]
Cytokines
Transforming growth factors (RSTK binding)
129109836 (gdf6a)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Herpes_IE2_3
Motif
Other DBs
NCBI-GeneID:
129109836
NCBI-ProteinID:
XP_054477952
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Position
20:complement(8349311..8355851)
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AA seq
452 aa
AA seq
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MDASRLVTLYLGLLLTFLGNIPCFQSAAIISPSAPRRNRGARISHRDGHRSSKILKDILA
STHPVVGHPKEDPKDAIVPHEYMLSIYRTYSAAEKLGLNASFFRSSKSANTITSFVDRGT
DDLLHSPLRRQKYLFDVSTLSDKEELVGAELRIFRRAPGNLQTSLQTTGLYDIQLYPCSS
DRLLDSRSLDPLDSTKAGWEVLDAWDMFKANQHHYHHPHPHPHHHQHQHQHHFQQGNQLC
FQLRVTLRKSDTEVDLRQLGLDRSGRSQQEKAILVAYTRSKKRENLFNEMKEKIKSRRSV
GEKEEAAAAAEEEEEGVSXEGVKGEGPRRRRRTALSNRHGKRHGKKSKSRCSKKALHVNF
KELGWDDWIIAPLDYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPNSTPPSCCVPT
KLSPISILYIDSGNNVVYKQYEDMVVEQCGCR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatctcgactcgttacgctatatctgggcctgctccttactttccttgggaat
ataccgtgtttccagtctgctgctatcatctctccctctgcgccgcggaggaaccgggga
gcccggatctctcatcgggacggacacaggtcatccaagatcctaaaagacatcctcgcg
tccacgcaccctgtcgtgggccatcccaaagaagacccaaaggacgctattgtgccgcat
gaatacatgctctccatatacaggacatactcggctgcagagaagctcggactaaacgca
agcttcttccgctcctctaaatctgccaacacaataacaagttttgtggacagaggaaca
gacgatcttttgcactctcctctgcgaagacaaaagtatctgtttgatgtctcaaccctt
tcagacaaagaggagctggtcggggcggaattaaggatatttcggagagcgcccgggaac
ctgcagacttccctgcagacgacgggcctctacgacatccagctctacccgtgcagctcg
gacagactgctggactccaggtctctggacccgctggactccaccaaggccggctgggaa
gttttggacgcgtgggacatgttcaaagcgaaccagcatcattaccaccacccccacccc
cacccccaccatcatcagcaccagcatcagcatcacttccagcaggggaaccagctctgc
ttccagctccgcgtcaccctccgcaagtcagacaccgaggtggacctgaggcagctgggg
ctggacaggagcggccggtcccagcaggagaaggccatcctggtggcctacacgcgctcc
aagaagagggagaacctgttcaacgagatgaaggagaagatcaagtcgcggaggtcggtc
ggggagaaggaggaggcggcggcggcggcggaggaggaggaggagggggtgtcgnctgag
ggggtcaaaggggaggggccccggcggcggcggaggaccgcgctgagcaaccggcacggc
aagaggcacgggaagaagtccaaatccaggtgcagcaaaaaggcgctgcacgtgaacttc
aaggagctgggctgggacgactggatcatcgcgcctctggattacgaggcgtaccactgc
gagggggtgtgcgacttccccctgaggtcgcacctggagccgaccaaccacgccatcata
cagacgctcatgaactccatggaccccaacagcaccccgcccagctgctgcgtccccacc
aagctcagccccatcagcatcctgtacatagactcgggcaataacgtggtgtacaaacag
tacgaggacatggtggtggagcagtgtgggtgcaggtag
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