Anoplopoma fimbria (sablefish): 129109888
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Entry
129109888 CDS
T09102
Symbol
sntb1
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129109888 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
129109888
NCBI-ProteinID:
XP_054478012
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Position
20:complement(3254379..3290961)
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AA seq
554 aa
AA seq
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MCESNKTTCLFKKEMAVVITRGVSGACGVQKSGFLEVLVRERWHKVWVNLNEEALTLSCE
ESCVNSNGVVNGSYLDNNNANSNNASTDLPERVPEAVANRKRCVKVTKQDVGGLGISIKG
GXENKMPILISKIFKGLAADQTQALYVGDAILSVNSVNLRDATHDEAVQVLKRAGKEVTL
EVKYMREATPYVTKGSPVSEIGWETPPPESPRLGSPTITSSSSSFSTFDPPSSPTLPSLS
LQGDRRCIPLKMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCPDQPSALSWFSAMHSV
TSTLAQRALAEVIQSTARTGVAGSKEIRHLGWLAGKTESEKQCWKPVLMVVTEKDLLLYE
SVPRGKEAWQSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAET
TKDLSMWTRHIVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPKLGDGENG
EERGAHTPTRPRVLLSYPYEKLKMSSDDGVRMLFLDFGGKEGEIQLDLHSCPKPIVFILH
SFLSAKIYRLGLVA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgagagcaacaaaaccacatgtctttttaagaaagaaatggcggtggtaataaca
aggggagtttcaggtgcctgcggagtccaaaaaagtggatttcttgaggttttggttcgg
gagcggtggcacaaagtttgggtcaacttaaacgaggaagcgctcacgttgagctgcgag
gagagctgcgtcaactccaacggggttgtcaacgggtcttacctggataacaacaacgcc
aactccaacaacgcgtccacggacctcccggagcgagtcccggaggcggtcgcgaacaga
aaacggtgcgttaaggtgaccaagcaggacgtcggaggacttgggatcagcatcaaaggg
gganaggagaataaaatgcccattctcatcagtaagatattcaagggactcgcagcggac
cagacacaggctctgtatgtcggggatgcgatcctgtctgtgaacagtgtgaacctgcgg
gatgcgacccatgacgaggctgtgcaggttctgaaacgggccgggaaagaggtgacactt
gaagtgaagtacatgcgggaggccacaccgtatgtcacaaagggctcccctgtgtcagag
atcggctgggaaaccccccctcctgagtctcctcgtcttggcagccctaccatcacctcc
tcttcctcctccttctccacatttgaccctccgagctctcctaccctgccctccctgtct
ctgcagggcgacaggaggtgcataccgctcaagatgtgttgtgtaacccgagccatgacc
acaccagaccctgagaacagacaactggagctgcactcccctgacgccaggcacaccgtg
gtgctgcggtgcccagaccaaccgtctgccctttcctggttttctgccatgcactctgtc
acatccacactggcacagcgggcgctggcagaggtcatccagagcacagccaggacgggg
gtagctggcagcaaagagatacgacacctgggatggctggcagggaagacagagagtgaa
aagcaatgctggaagccggtgctgatggtggtgacagagaaagacctactgctgtatgaa
agtgtaccacgaggaaaggaggcatggcagagtcctgcacacacttatccacttttagca
actcgcctggtccactctggccctgaccgggggtcgcctcactctggcacagagctgttc
tttgccactcggactggcacacgactcggcatcgagactcacctgttccgggcagagacc
accaaggatctgtccatgtggaccagacacatagtcaacggatgtcacgcctcagctgag
atgattaaagaagtcacgacaagttgtctataccagagtcaggagtgccggcttgtgatt
cactacgaacagggcttctctgtgctggctgaccccaaactgggagacggggaaaatggg
gaggagagaggagctcacacacctaccaggccccgggtgctcctgtcctacccctacgaa
aaactaaagatgtcctcggatgacggagttcgcatgctcttccttgactttggagggaag
gagggggagattcaactggacctccactcgtgtccgaagcccatcgtctttatcctccac
tccttcctctctgctaagatctaccgtctgggtctggtggcctga
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