Anoplopoma fimbria (sablefish): 129110100
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Entry
129110100 CDS
T09102
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
afb01009
]
129110100 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
afb04515
]
129110100 (ptprub)
Enzymes [BR:
afb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
129110100 (ptprub)
Protein phosphatases and associated proteins [BR:
afb01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
129110100 (ptprub)
Cell adhesion molecules [BR:
afb04515
]
Immunoglobulin superfamily
Type II RPTP family
129110100 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
FN3_DSCAM-DSCAML_C
ig
Y_phosphatase3
Pur_ac_phosph_N
Ig_3
PTPlike_phytase
Ig_2
PTP_tm
I-set
Motif
Other DBs
NCBI-GeneID:
129110100
NCBI-ProteinID:
XP_054478233
LinkDB
All DBs
Position
20:2229855..2377479
Genome browser
AA seq
1434 aa
AA seq
DB search
MNTCAFLLILTVQIYADGIEGPTAAGCTFEEDSEPSLCDFTQGEEDDFDWLLFRTYSSPY
ASPDLLRGSFMLVNSSQHAVGHRAQLMLQTLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGSPVWNTSGSHAKQWHQVDLAVSTFWPNEYQVLIEATVSRERRGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAGQNATFQCVAAGRASEAEKFLLERHNGDILTTASVKHLS
HRRFVVSFQLDGVQRTDQDLYRCVTQSPRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLAAIDIQPRQLSLQWENLAFNLTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFTLRDLPPYHGIYVRLSLANPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMVFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLKNETYHMFSNLHPGTTYLISVRARTVKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSTYQVVVEEETVKKVKRELGLQDCFPLPMSHGEAQA
RGTPHYYTAELPPSSLPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQHSEEMGLILGVCAGGLVVLILLLGAVIIIIKKGKPVNM
NKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRSDARSSVNEASSLL
GGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFDGWDCTKK
KDKTKGRHDTLGYDRHRVKLHPLLGDPNSDYINANYIDGYHRSNHFIATQGPKQETLYDF
WRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIKITLLKTETLAEYTVRTFAL
ERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPDAGPVVVHCSVGAGRT
GCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFIHDAILEACLCGETAI
LVNEFAVTYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECSIALLPRNREKNRSMDV
LPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPGTTADFWRLVFDYGCTA
VVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVITRLFRVKNVTRLQEG
QLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRTVVHCLNGGGRSGTLCA
CNILLEMIQYQNMVDIFYAVKTLRNCKPNMIESLDQYRFCYDLVLEYLDCFEGR
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcctttctgctgattctgactgttcagatctacgccgatggcatcgag
gggccaacagcggctggctgcacgtttgaagaggattcagagcccagtctttgtgacttc
acccagggggaggaggatgacttcgattggctgctgtttcggacgtacagttcaccttat
gccagccctgaccttctgcgaggatcctttatgttggtgaactcttcccagcatgccgtg
ggtcatcgtgctcagctgatgctgcagacactgagtgaaaatgacacccactgcgtccag
ttcagctacttcctgtacagtcgtgatggccacagcccaggggccctacgggcgtatgtt
cgagtcaacgggggtccgctcggcagtccggtgtggaacacgtcggggtctcatgccaag
cagtggcaccaggtggatctggcagtgagcaccttctggccaaatgaataccaggtactg
attgaggcaacagtttccagagagcggagaggctacattgccatagatgacatcatggtg
ctcaactacccctgctataaggcgccgcatttctccaggctaggagatgaggaggtcaat
gctgggcaaaatgctacttttcagtgtgttgctgctggaagagcatcagaggctgagaag
ttcctgctggagagacacaacggtgacattttaacaacggcatcagtcaagcacttgagt
caccggcgctttgtggtatccttccagctagacggcgtccagcgaacggatcaagacctt
taccgctgtgtcactcagtcccccaggggctctggggtctccaactttgctgaactcgtt
gtcaaagtacctccttcccccattgcaccaccccagctgctgcgtgccggctccacttac
ctaatcatccagctcaacaccaactctatcctgggagatggccccattatcaggaaggag
attgagtaccgcgccagccagtctccgtggtcagaggtgcacggagtcaacatggtcacc
tataagctgtggcacctggatccagacacagaataccacatcagcgtgctgctgactcgg
cccggagagggaggaactggcccacctggaccgcctcttgtgagcaggaccaagtgtgca
gagcctatgcgtgcattgcggggcctcgcagccatagatatccagcccaggcagttgtcc
ctgcagtgggagaatttggcgttcaacctgacacgctgccacacctactcagtgtccctg
tgctaccgctacaccacggcgggaggcggcggaggccacaataccaccgtgcgcgaatgc
ctggcagtggaacacaacgcttcacgctttacactgcgtgatctgccaccctaccatggc
atctatgtccgtctgtcactggcaaaccctgagggaaagaaggagggcagagaggtcaca
ttccagaccgaggaggacattcccggaggcatagcgccagagtcgctcacctttaccccg
ctggatgacatggtcttcctgaagtgggaggagcctgttgagcccaatggacttattacc
caatatgagataagttaccagagcattgagtcgtctgatccaggcatcaacgtcccgggg
ccgagaagaactgtgtccaaattgaagaatgagacctaccacatgttctccaacctccac
ccggggacaacttacctcatctcagttcgagcccgcacagtcaagggctttgggcagacc
gctctcacagaaatcaccactaacatctcagctccgacgtttgattacggagacatgccg
tcccccctgagcgagacagagagcaccattactgtcctgttgcgccccgcccaaggcaga
ggggcacctgtcagtacataccaggtggtggttgaagaggagaccgtgaagaaagtaaag
agagagttggggcttcaagactgtttccctttgcccatgtcccacggtgaggcacaggcc
cggggcacaccacactactacacagccgagctgccacccagcagcctcccagaggccagt
cccttcactgtgggcgacaatcacacttacaacggctactggaacagccctttggaccca
cgcaagagctaccttgtctacttccaggctatgagcaacttcagaggggaatccagaata
aactgcatccgcatagctcgcaaagcggcttgcaaggatcaccgcaaggctctggaggtg
tcccaacactctgaggagatgggtctcattctcggggtatgcgccggaggtctggtggtc
ctcatccttctgctgggtgccgtgatcatcatcattaagaaggggaaaccagtgaacatg
aataagacacccattacctaccggcaggagaagagccatatgggctccatggagcgcagt
ttcacagaccagagcaccttacaggaggatgaaagaatggccctttccttcatggatgct
cacacctgcggcacacgcagtgacgctcgtagttcagtgaacgaggccagcagcctgctg
ggaggctccccgaggcaccagtgtggacgcaaaggctccccctaccacacagggcagctc
caccccgctgtccgagtggctgaccttctccagcacatcaaccagatgaagactgccgag
ggctacggctttaaacaggagtatgagagcttctttgatggctgggactgcacaaagaaa
aaggacaaaaccaaagggaggcatgacacgttgggatatgaccgccacagagtcaagctg
caccctcttctgggagaccccaactcagactacattaacgccaactacattgatggctac
catcgatccaaccacttcatcgccactcagggacccaagcaggagactctgtatgatttc
tggaggatggtctggcaagaaaattgtttcagcatcgtcatgataactaaactggtggag
gttggcagggtgaaatgctgtaaatactggcctgatgacagcgagatgtatggtgacatc
aaaatcactctgcttaagacagagactctggctgaatacacagttcgcacctttgccttg
gagagaagaggatactcaaccaagcatgaggtgcgtcagttccacttcacatcctggcct
gagcacggggtgccgtatcacgcaactggattgttggcctttatacgaagagtgaaagcc
tctacacctcctgacgctggccctgtggtggtccactgcagtgtgggggcgggccgcacc
ggctgctacatcgtgctggatgtcatgttggacatggcggagtgtgaaggcgtggtggac
atctacaactgtgtcaaaaccctctgctctcgacgcatcaacatgatccagacagaggag
cagtatatctttatccatgatgccattttggaggcttgtctgtgcggagagactgccatc
ttggtgaacgagttcgcggtcacttacaaagagatgctgcgagtggattcccagagtaat
tcctctcagctacgggaggagtttcagacgctcaactctgtgacgccccacctggatgtg
gaagagtgcagcattgctctgttgcccagaaaccgagagaaaaaccgtagcatggatgtt
ttgccccctgatcgcgcactggccttcttggttacgacagaaggggagagcaacaattac
atcaacgctgctctcgctgacagcttccaccggcaggctgcttttatcgtcacccctcac
cctctgccgggcaccacggctgacttttggaggcttgtctttgactacggctgcacagca
gtggtcatgctcaaccaactcaaccagtcaaactctgcctggccttgtgttcagtactgg
ccagagcctggtttacaacagtacgggcccatggaagtggagtttctgtccatgtcagca
gatgaggatgtcattactcgtctgtttcgggtcaagaatgtcacgaggctccaagagggc
cagctggtggtgtgtcagttccagttcctgcgctggtcagcgtatcgagatgttccagac
tctaagaaggctttcctcaacctgctggctcaagtgcacaagtggcagagggagtgtgga
gaaggacgcactgttgtccactgccttaacggtggtggtcgcagtgggaccctctgtgcc
tgcaacattcttctagagatgatccagtaccagaacatggtggacatcttctatgctgtc
aaaactctacgcaactgcaaacccaacatgattgagtctctggaccagtatcggttctgc
tatgaccttgtactggagtacttggactgctttgaaggaagatag
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