Anoplopoma fimbria (sablefish): 129110132
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Entry
129110132 CDS
T09102
Symbol
si:dkey-238d18.4
Name
(RefSeq) TBC1 domain family member 15
KO
K20168
TBC1 domain family member 15
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
129110132 (si:dkey-238d18.4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129110132 (si:dkey-238d18.4)
Membrane trafficking [BR:
afb04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
129110132 (si:dkey-238d18.4)
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Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
ADK
Herpes_teg_N
Motif
Other DBs
NCBI-GeneID:
129110132
NCBI-ProteinID:
XP_054478287
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Position
20:complement(1916272..1922267)
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AA seq
459 aa
AA seq
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MEDPDHGRSTAGEEASSPDSHKPGVRFQSRVAPVSSPALSASRLTFPGVMDAEGRVDESR
LRMHIFKNGGVCPSERGLVWRFLFGMYPCSSTALERSLLQEQMVVRYQVMKRKWKQFLPS
AMRMHLNGTDAELVAAVRYFDQRQAVAQQQTQDQSEEVRDRLAFLQLQAQILFERVTFDQ
EELREATRIIDKDVPRTNRDLSYYQGEGSGNLLVLRDILITYAAFHPEVSYAQGMNDLCS
RFLEVLDSEVDTYWSFSCYMERFYKDFRADGLHRKIELEAALLKELDPQLYAHLVTDSME
SFTFCHRWLLLGFQREFEHSDALRLFEILSCDHLELISQQVDRARYQERLARKCSTEDNS
ESELQAINTDFTFELFICAAILLENRESLLRCQNEVQLIQFTSSLQGTLELNSTLKKAEH
HLYNYCKRCAWDYMNGCCRVDKSKGEDFLYQLRSLLVLK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaagacccggatcacggtagatccacggccggagaggaggcgagctcaccggacagt
cacaaaccaggtgtccgcttccagagcagagtagcaccggtcagctctcctgctctgtcc
gcctcacggctcacctttcctggggtcatggacgccgaggggagggtggatgagtcaagg
ctgaggatgcatattttcaaaaacggtggcgtttgtccctctgagcgtggcctggtgtgg
cgcttcttgtttgggatgtacccgtgcagctcaacagctttagagcgctctctgctgcag
gagcagatggtggtacgttaccaggtcatgaagagaaagtggaagcagttccttccttcg
gccatgcggatgcacctcaacggcaccgacgctgaattggtggcagcagtcaggtacttt
gaccagaggcaggcagtggcccagcaacagacccaggaccagtctgaggaggtcagggac
cgtctggctttcttgcagcttcaggcacagatattgtttgagcgagtcacgtttgaccaa
gaggagctgcgggaagccacaaggatcatcgacaaggatgtgccaagaactaacagagac
ctgagctattatcagggtgaaggttcaggcaacctgttggttttgagagacatcctcata
acttatgctgcatttcatccagaggtcagttatgcccaaggaatgaatgacctgtgcagc
cggttcctggaggttctagactctgaggttgacacatattggagtttctcctgctacatg
gaaaggttctacaaggacttcagggctgatggtctgcacaggaaaatagagttggaggca
gccctgttgaaggaactggaccctcagctttatgcgcatttggtgacagacagcatggag
agtttcaccttctgccacaggtggctgctgctgggtttccagagggagtttgaacacagt
gacgcattacgtttgttcgagatcctgagttgtgaccacctggagcttatctcccagcaa
gtagaccgagctcgctatcaggaaagacttgcacgaaaatgcagcacagaggacaattca
gagtcagagctgcaggccatcaacactgacttcacctttgagctcttcatctgtgcagct
atcctgttagagaacagagagtctctgctgcgttgccaaaatgaagtacaactaatccag
tttactagcagccttcagggaacactggaactgaacagcacactaaagaaagcagagcac
catttgtacaactactgcaagcgctgtgcttgggactatatgaatgggtgctgtagagtg
gacaagagcaaaggagaggactttctttatcaactccgtagtttacttgttttaaagtga
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