Anoplopoma fimbria (sablefish): 129110185
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Entry
129110185 CDS
T09102
Symbol
irx2a
Name
(RefSeq) iroquois-class homeodomain protein IRX-2a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129110185 (irx2a)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
129110185 (irx2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
129110185
NCBI-ProteinID:
XP_054478351
LinkDB
All DBs
Position
20:complement(4428661..4432446)
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AA seq
498 aa
AA seq
DB search
MSYPQGYLYQPPGSLALYSCPAYGASALAAPRTEDLARSSSGSAFSPYPGSAAFSGSAGA
GFSSPLSYSTDPTTGFPSYMSSPYDVHTSGMAGALSYHPYGSPGYPYQLNDPAYRKNATR
DATATLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPR
NKSEDEDEEDGDGERKEGDRSEKNLENSEASAEDEGISLHVDTLTDHSCSAESDGEKTSC
RVGELGSDQAGDEDGEDQNHEPLSVTSSPLTGVEAPLLGHHHHQHHQHHHQHLQHLHHLH
SQREDLARSLITNNINTNKSSCLDSRPSPQNPTVKPKLWSLAEIATSDQKQHHQQPNCSS
SSSSGLLTPPSSTTSPAASSPSLYPAPSILGRPIYYTSPFYSNYTNYGNFSPLQGQGILR
YTNSSGVSLAAAAVEGLSSSHQAVEGLSSSHQAVEGSSNPKHRPDSPLVKMNPNQIVVVE
QQQQQHFRSAHLEAKKGT
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagggttacctctaccagcccccgggctctctggctctctactcctgc
ccggcttacggggcctcggctctggctgccccgaggactgaagacctggcgaggtcgtcc
tccggctcagccttcagtccttaccccggatcggctgctttctccggatcggctggtgca
ggcttctccagtccgctgtcatactccacggatccaacaacgggattcccatcctacatg
agctctccctatgacgtgcacacgtcaggcatggccggggcattgagttaccacccctac
gggagtccggggtatccctaccagctcaacgacccggcttaccgcaagaacgccaccagg
gacgccacggccaccctaaaagcctggctgcaggagcacaggaagaacccgtacccgacc
aaaggggagaagatcatgctggccatcatcaccaagatgaccctgacgcaggtctccaca
tggttcgccaacgccaggaggaggctgaagaaggagaacaagatgacctgggctcccagg
aataagagcgaagacgaggacgaggaggacggggacggagagaggaaagaaggggatcga
tctgaaaagaacctggagaacagcgaggcttcagcggaggatgaaggtatcagcttgcac
gtcgacaccctgacggatcactcctgctcggctgagtccgacggggagaagaccagctgt
cgtgtgggagagctgggctccgaccaggccggcgacgaggacggtgaggaccagaaccac
gaacccttatccgtcacatcatcacctctaacgggagtagaagctcctcttctcggtcac
caccaccaccagcaccaccagcaccaccaccagcacctccagcatctccatcatctccac
agccagcgtgaggatctggcccggagcctcatcactaacaacattaataccaataaatct
tcctgcctcgatagcagaccttcacctcagaaccccacggtcaagcccaaattgtggtcg
ctggctgaaattgctacctcggaccaaaagcagcatcatcagcaaccgaattgctcctcc
tcctcctccagtggcctcctcacccccccgtcttccaccacctcccctgcagccagctcc
ccctccctctacccggccccctccatccttggaagacctatttattacacttctcccttt
tatagcaattacacaaactatggcaacttcagccccctgcagggccaagggatcctgcgg
tatactaactcatctggagtgagtctggctgctgctgctgtggagggtctgagctcctct
caccaggctgtggagggtctgagctcctctcaccaggctgtggaggggagctcaaacccc
aaacacaggccagactctcctctcgttaaaatgaacccaaaccagattgttgttgtcgag
cagcagcagcagcagcatttcagatctgcacatttagaagcaaagaaaggtacgtaa
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