KEGG   Anoplopoma fimbria (sablefish): 129110186
Entry
129110186         CDS       T09102                                 
Name
(RefSeq) transcriptional repressor scratch 1-like
  KO
K09219  scratch
Organism
afb  Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:afb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:afb03000]
    129110186
Transcription factors [BR:afb03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 Snail
    129110186
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 zf-C2H2_6 C2CH-3rd_BIRD-IDD zf-C2H2_jaz zf-met DUF7479 zf-BED zf-C2H2_11 zf-C2H2_15 HypA zf-C2HC_2 DUF7565 DUF7351 Zf-C2H2_ZNF451 zf-C2H2_16
Other DBs
NCBI-GeneID: 129110186
NCBI-ProteinID: XP_054478352
LinkDB
Position
20:66426..71656
AA seq 279 aa
MPRSFLVKKVKLDDFAGADLENVYRHRTDLSLRLHDKAGYISDYISPVVYDGESDGGIKV
PSPDPHYDGIHSDYGAPDSESPDSPDSEITDGYINGDAAVSEGYTVDAFFITDGRSRRKA
ISSPRAIQRHTCNECGKTYATSSNLSRHKQTHRSLDSKLAKKCPTCGKVYVSMPAMAMHL
LTHDLKHKCDVCGKAFSRPWLLQGHMRSHTGEKPFGCAHCGKAFADRSNLRAHMQTHSAF
KHFKCKRCNKTFALKSYLNKHYESACFKGPFSPLGPLDA
NT seq 840 nt   +upstreamnt  +downstreamnt
atgccaaggtctttcctggtgaaaaaggtgaaactagatgatttcgccggagcggatttg
gagaacgtctaccggcacaggacagacctcagcctgcggctccatgacaaagctggttac
atcagtgactacatcagccccgtcgtgtacgatggtgagagtgacggtgggatcaaagtg
ccctccccagacccccactacgatggtatccacagcgactacggggcccctgactctgag
tctcccgacagtcctgactcagaaatcaccgacggctacatcaacggagacgctgctgtg
agcgagggttacacagtcgatgccttcttcatcaccgacggccgctcgaggaggaaagct
atcagcagtccccgggccatccagaggcacacgtgcaacgagtgcggcaaaacctacgcc
acgtcttccaacctgagccggcacaaacagacacaccgctcgctggacagcaagctggcc
aagaaatgtccgacctgcggtaaggtgtacgtgtccatgcccgccatggccatgcacctg
ctcactcacgacctcaagcacaagtgtgatgtgtgcgggaaagcgttcagtcgaccctgg
cttttgcagggccacatgcgctctcacacgggcgagaagccgttcggatgcgcccactgc
gggaaggccttcgcagaccgatccaacctgcgcgctcacatgcagacccactcggccttc
aagcacttcaagtgcaaacgctgcaacaagaccttcgcgctcaagagttacctgaacaag
cactacgagtctgcctgtttcaaaggccccttctctcctctcggccccctggatgcatga

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