Anoplopoma fimbria (sablefish): 129110289
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Entry
129110289 CDS
T09102
Symbol
grik5
Name
(RefSeq) glutamate receptor ionotropic, kainate 5
KO
K05205
glutamate receptor, ionotropic kainate 5
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04080
Neuroactive ligand-receptor interaction
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
129110289 (grik5)
04082 Neuroactive ligand signaling
129110289 (grik5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
afb04040
]
129110289 (grik5)
Ion channels [BR:
afb04040
]
Ligand-gated channels
Glutamate (ionotropic)
129110289 (grik5)
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GyrI-like
Motif
Other DBs
NCBI-GeneID:
129110289
NCBI-ProteinID:
XP_054478460
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All DBs
Position
20:18617718..18646723
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AA seq
1067 aa
AA seq
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MPALPALLLSIHFLSFLLVAMLPHSLSQAPLLSSVRMAAILDDQSVCGRGERLALALARE
NINSVMEGPARARVEVDIYELQKDSQYDTTDTMCQILPKGVVSVIGPASSPASGSTVSHI
CGEKEIPHVKIGPEETPRLPYLRFASVTLYPSNEDLSLAIEAILRSFNYPSASLVCAKAE
CLLRLEELVRRFLISRETLSIRMLDDNLDPTPLLKEIRDDKVATIIIDANASVSYLILKK
ASELGMTSAFYKYILTTMDFPLLRLDDIVDEQSNIVGFSMFNTTHPFYLEFIRSLNLSWR
EGCDLTYPGPALSSALMFDAVHVVVGAVRELNRSQEIGVKPLSCTSPQIWQHGTSLMNYL
RMVEYDGLTGRVEFNSKGQRTNYTLRILEKHRGGHKEIGVWYSNNTLAMNSTSLDINVSE
TLANKTLIVTTILENPYVMRRDNYQDYQGNDQYEGFCVDMLKELADILKFSFKIKLVDDG
LYGAPEPNGSWTGMVGELINRKADLAVAGFTITSEREKVIDFSKPFMTLGISILYRVQLG
RKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRERRDMLENQY
TLGNSLWFPIGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEV
PIESPDDLADQTNIEYGTIHGGSTMTFFMNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIA
RVVNSKYAFLMESTMNEYHRGLNCNLTKIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQ
ENNRLEILKRRWWEGGKCPKEGDHRAKGLGMENIGGIFVVLICGLIIAVFVAIMEFVWST
RRSAETDEVCPHTCPRRPHRHTPVSVCQEMITEFRNAVSCKKSSRMRRRRPLSSSAALRH
PTRIALGAPRPLRLVREMRLSNGKLYSGAGPLTGGAGGGGAGGTAPPDLGPGPQRILDDP
LGANTTPPPPAPTPVMLPARSCTHVRICQECRRIQSLRSGSSLGSTSTRIPPSSAPLPRL
PPPPPPSSSNTDSEGGGGPAQGGYTTAHHLIPLDPFHLHRTATPQTY
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgccggctctgccagcactgctgctgtcaatacacttcctctccttcctgttagtcgcc
atgctgccacactccctcagtcaggcccctttgctctcttctgtccgaatggcggcaatc
ctggatgaccagtctgtttgtgggcgtggggagcggctggcgctggccctggccagggag
aacatcaacagcgtgatggagggtccggccagagcccgagtggaggtggacatatacgag
ctgcaaaaagactcccagtacgacactaccgacaccatgtgtcagattctacccaaaggc
gtcgtctctgtgataggtcccgcctccagccccgcctctggctctactgtcagtcatata
tgtggagaaaaggagatccctcacgtcaagattggtccggaggaaactccccgcttgccg
tacctgcgcttcgcctctgtcactctgtaccctagcaacgaggacctgagcctggccata
gaagccatcttgcgctcgttcaattacccctcagccagcctggtctgtgccaaggctgag
tgcctattgagattggaggaactggtccgccgctttctcatctctcgggagacactgtca
atcaggatgctggatgacaacctggacccgacgccgctgctgaaggagatccgtgacgac
aaagtggccaccatcatcattgacgctaacgcttctgtctcctatctcatcctcaagaag
gcgtctgagctggggatgacatcagcgttttacaagtacatactgaccacgatggacttc
ccgctcttgagactggatgatatcgtggatgagcagtcaaacattgtgggtttctccatg
tttaacaccacccatcccttctatttggagttcatcaggagcctgaacctctcttggagg
gagggatgtgacctcacgtaccccggccccgcgctctcgtcagcattgatgtttgatgcg
gtgcatgtggtggtgggggccgtaagggaattgaaccgcagtcaggaaattggagtgaag
ccactcagctgcacatcaccccagatctggcaacatgggaccagtcttatgaactacctg
cgcatggtggagtacgatggtctgacaggccgcgtggagttcaacagcaaaggtcagagg
accaactataccctgaggattctggagaaacacagaggaggccacaaagagatcggggtc
tggtactccaacaacactctggcaatgaactccaccagtctagatatcaatgtctcagag
acgctggccaacaagacactcattgtcaccaccatactggagaacccatatgtgatgcgc
cgagacaactaccaggactaccagggcaacgaccagtacgagggcttctgtgtcgacatg
ctgaaggagctggcagacatcttgaaattctccttcaagatcaagctggtggacgatggc
ctgtatggcgctccagagcccaacggctcttggactggcatggtcggagagctaatcaac
aggaaagcagacctggccgtagcgggcttcaccatcacgtcagagagagagaaagttatc
gacttctctaagccgttcatgaccctggggatcagcatcttgtacagagttcaactgggt
cggaagccgggttacttctccttcctcgatcccttctctccagccgtctggctcttcatg
ctgctcgcctacctggctgtcagctgtgtgctcttcctggctgcaaggctgagcccgtat
gagtggtacaaccctcacccgtgtctgagagagcgcagggacatgttggagaaccagtac
acgctgggaaacagcctgtggttccctattggaggcttcatgcagcagggatcagagata
atgcccagagccctgtccaccagatgtgttagcggggtgtggtgggcgttcaccctgatc
atcatctcctcctacacggccaacctggccgccttcctgaccgtccagaggatggaggtt
cccatcgagtctccggacgacttggccgaccagaccaacatcgagtatggtaccatccac
ggagggagcaccatgacctttttcatgaactcccgttaccagacctaccagcggatgtgg
aactacatgtactccaagcagcccagcgtctttgtgaaaagcacggaggagggcatcgcc
cgcgtggtcaactctaagtacgccttcctgatggagagcaccatgaacgagtaccaccgc
ggcctcaactgtaacctcacaaagataggaggcctactggacaccaagggttacggcatc
ggcatgccactgggttctccgttcagagatgagatcacgctggccatcctccagctgcag
gagaataacaggctggagatactgaagaggcgttggtgggagggaggcaaatgccccaaa
gagggggaccaccgtgccaagggtctgggcatggagaacatcgggggcatctttgtggtg
ctgatctgcggtctcatcatcgccgtgtttgtggccattatggagtttgtgtggtcgacg
cgccgctctgcagagaccgatgaggtatgcccccatacctgcccacgccgaccccacaga
cacaccccagtgtctgtctgtcaggaaatgatcacagagttcagaaacgccgtctcctgt
aagaagagctcccgtatgcgccgccgtcggcccctcagcagctcagcagccctgcgacat
cccacgcgcatcgctctgggggcccctcggccccttcgcctggtccgagagatgcgcctc
agcaacggcaagctctacagtggagccggcccgctgacgggtggagctggaggaggcgga
gcaggagggacggcgcctcccgatctagggcccgggccccagcggatcctagatgatcca
ctgggggccaacaccacccctcctccgccagcccctacccctgtgatgctgcccgcccgc
agctgcacccatgtgcggatctgccaggagtgtcggaggatccagagcctgagatcaggc
agcagtttaggatcgacctcaacgagaataccaccttcatcagcgcccctgccaaggcta
cccccacccccacccccatcctcatccaacacagacagtgagggcggagggggcccagcc
caaggcggctacaccacagcccaccacctcatacctctcgacccattccacctccacaga
acagcaacaccacagacctactag
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