Anoplopoma fimbria (sablefish): 129110426
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Entry
129110426 CDS
T09102
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03030
DNA replication
afb03410
Base excision repair
afb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129110426 (fen1)
03410 Base excision repair
129110426 (fen1)
03450 Non-homologous end-joining
129110426 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afb03032
]
129110426 (fen1)
03400 DNA repair and recombination proteins [BR:
afb03400
]
129110426 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afb04147
]
129110426 (fen1)
DNA replication proteins [BR:
afb03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
129110426 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
129110426 (fen1)
DNA repair and recombination proteins [BR:
afb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
129110426 (fen1)
Exosome [BR:
afb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
129110426 (fen1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
129110426
NCBI-ProteinID:
XP_054478478
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All DBs
Position
21:complement(17405505..17410618)
Genome browser
AA seq
380 aa
AA seq
DB search
MGIHGLTKLIADQAPGAIKEQDIKNYFGRKIAIDASMCLYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGEKRAEAEKMLAQAQELGEQ
ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTASEAKKLPIQEFHYSRILQDIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLKAEVVDCSTVDLKWSE
PDEEGLIQFMCNEKQFSEDRMRNGCKKILKSRQGSTQGRLDSFFSITGSLSSKRKEPELK
GSAKKKQKTGATPGKFKKGK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgggaatacatggactcactaagctgattgctgaccaggcccctggtgccatcaaagag
caagacatcaagaactactttggcaggaaaattgctatagatgcctctatgtgtctctac
cagttcctgattgcagtgcgacaggacggtaacgttctgcagaatgaggatggcgagacg
acgagccacctgatgggaatgttctaccgcacgatccgaatgctggaacatggcatcaaa
cctgtgtacgtctttgacggcaagcccccacagctcaagtcagcagagctggagaagaga
ggggagaagagggcagaagctgagaagatgcttgctcaagctcaggaactgggggaacaa
gagaatattgacaaattctccaagcgtctggtaaaagtcaccaagcagcacaacgatgag
tgcaagaagctgctgaccctgatgggagtgccctacattgaggctccatgtgaggccgag
gccacctgtgccgctctggttaaagcagggaaggtctttgccacagcaacggaggacatg
gatggactgacctttgggacaaatgtcctgctcagacacctcaccgccagtgaagcaaag
aaacttcccatccaagagtttcactacagtcgcatcctgcaggacattggcctgaccaat
gaacagttcatagacctgtgtattctgctgggctgcgactactgcggcaccatcaaggga
attgggcccaagagagccatcgacctgatcaaacaacatggcagcattgaggagatccta
gaaaacattgactccagcaagcaccctgctccagaggactggctgtacaaagaggccagg
ggtttgtttctgaaggcagaagtggtggattgttccacagtggacttgaagtggagtgag
ccggatgaggagggactgattcagttcatgtgtaacgagaaacaattcagtgaggacagg
atgcgtaacggctgtaagaagattttaaagagccgacagggcagcacacagggacgactg
gactctttcttctccatcactggatcgctgtcctccaaacgcaaggaacctgagcttaaa
ggatcagcgaaaaagaagcagaagacaggagccacgccgggcaaattcaagaagggaaaa
tag
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integrated database retrieval system