KEGG   Anoplopoma fimbria (sablefish): 129110426
Entry
129110426         CDS       T09102                                 
Symbol
fen1
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb03030  DNA replication
afb03410  Base excision repair
afb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    129110426 (fen1)
   03410 Base excision repair
    129110426 (fen1)
   03450 Non-homologous end-joining
    129110426 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:afb03032]
    129110426 (fen1)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129110426 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129110426 (fen1)
DNA replication proteins [BR:afb03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    129110426 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     129110426 (fen1)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     129110426 (fen1)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129110426 (fen1)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 129110426
NCBI-ProteinID: XP_054478478
LinkDB
Position
21:complement(17405505..17410618)
AA seq 380 aa
MGIHGLTKLIADQAPGAIKEQDIKNYFGRKIAIDASMCLYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSAELEKRGEKRAEAEKMLAQAQELGEQ
ENIDKFSKRLVKVTKQHNDECKKLLTLMGVPYIEAPCEAEATCAALVKAGKVFATATEDM
DGLTFGTNVLLRHLTASEAKKLPIQEFHYSRILQDIGLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDSSKHPAPEDWLYKEARGLFLKAEVVDCSTVDLKWSE
PDEEGLIQFMCNEKQFSEDRMRNGCKKILKSRQGSTQGRLDSFFSITGSLSSKRKEPELK
GSAKKKQKTGATPGKFKKGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaatacatggactcactaagctgattgctgaccaggcccctggtgccatcaaagag
caagacatcaagaactactttggcaggaaaattgctatagatgcctctatgtgtctctac
cagttcctgattgcagtgcgacaggacggtaacgttctgcagaatgaggatggcgagacg
acgagccacctgatgggaatgttctaccgcacgatccgaatgctggaacatggcatcaaa
cctgtgtacgtctttgacggcaagcccccacagctcaagtcagcagagctggagaagaga
ggggagaagagggcagaagctgagaagatgcttgctcaagctcaggaactgggggaacaa
gagaatattgacaaattctccaagcgtctggtaaaagtcaccaagcagcacaacgatgag
tgcaagaagctgctgaccctgatgggagtgccctacattgaggctccatgtgaggccgag
gccacctgtgccgctctggttaaagcagggaaggtctttgccacagcaacggaggacatg
gatggactgacctttgggacaaatgtcctgctcagacacctcaccgccagtgaagcaaag
aaacttcccatccaagagtttcactacagtcgcatcctgcaggacattggcctgaccaat
gaacagttcatagacctgtgtattctgctgggctgcgactactgcggcaccatcaaggga
attgggcccaagagagccatcgacctgatcaaacaacatggcagcattgaggagatccta
gaaaacattgactccagcaagcaccctgctccagaggactggctgtacaaagaggccagg
ggtttgtttctgaaggcagaagtggtggattgttccacagtggacttgaagtggagtgag
ccggatgaggagggactgattcagttcatgtgtaacgagaaacaattcagtgaggacagg
atgcgtaacggctgtaagaagattttaaagagccgacagggcagcacacagggacgactg
gactctttcttctccatcactggatcgctgtcctccaaacgcaaggaacctgagcttaaa
ggatcagcgaaaaagaagcagaagacaggagccacgccgggcaaattcaagaagggaaaa
tag

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