Anoplopoma fimbria (sablefish): 129110431
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Entry
129110431 CDS
T09102
Name
(RefSeq) E3 ubiquitin-protein ligase RNF31-like
KO
K11974
E3 ubiquitin-protein ligase RNF31 [EC:
2.3.2.31
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04217
Necroptosis
afb04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
129110431
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129110431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129110431
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
129110431
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
129110431
Multi subunit type E3
LUBAC complex
129110431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_HOIP
E3_UbLigase_RBR
IBR_1
PUB
IBR
ANCHR-like_BBOX
Zn_ribbon_RanBP
zf-B_box
Motif
Other DBs
NCBI-GeneID:
129110431
NCBI-ProteinID:
XP_054478483
LinkDB
All DBs
Position
21:1731604..1755888
Genome browser
AA seq
1097 aa
AA seq
DB search
MSSSPASVQMEEVQRRALSLLSSSGLAQDVKAEVQAMAAILLPLSEKYRHLGVEAMLREN
MACRNTQEVLESLSRLVKALSILEKYGCNLTSPARPRYWRSVKHNNPVFKTTVDAIKGGR
TVLFLYGYTNQQIDGLSFPDDVSEPDTAKVAAVTLEVMTLRTEVDMLVKGTHPHPENFRD
IIPFIIQQGQLVPDAVVIPLGDEQQVVKPRVPSLPPKPTLGPGGQPLKPSTVSNCNLCGT
SSSLVCPSCENQTFCDECDNVFHRHPSRANHKRDKIHKTQQGICTICGISAVHAQCSTCV
QMLCENCDKLFHSHPDRKGHNRTFVTPAKTSSLSLSPWECAHCTTVNEMRAVLCSTCERP
RLATAASTAQESPMSVPTSPNTEWQCQSCTVVNQGSSILCEVCERPRLATRPPVAPLPSS
PGSLSDSGTKWMCEFCTYVNTNPTVVCEMCNLSCKDSAGVSLPQSLQQTPSSAKEQPTLR
VKPQPKPRVDVEVKRQKMMREDGLHLVQQIREAEKRGVSAEEVYAAICMCGGSNTNPCDW
LTSELPHLLDEICAMAASVQVERDGEEAEPSGPSGTGEGGKLSRAEAKLAWLSAGGDTDR
AVRQLLRDRQVKMKELHSLGFRDVLRCEEALRLSGGEVKGALSLLQRPLLEPFHQRIWID
QPEPPIDPKHPDKQRMCRRLLALYELPSWGRCELVLSLLQEPGVTYSLDDVVQAVKVSPD
KDFIKRLLINECPCCLSIFPRSKMQSLTSCQCSVCHECFGQHFTITVRDKHIRDMVCPVC
REPDINDPEQLDSYFSTLDIQLRNCLEPDVYELFHKKLTEHALMKDPKFLWCCHCTSGFI
NDGDQLKVTCPSCRRSFCAQCKKPWEPQHQDLSCEQFQQWKRDNDPEYQRQGLAGFLRDN
GITCPSCRFQYALTKGGCMHFSCSQCRYQFCSGCNNPYHKTVCKTPQCSYTGLHAHHPRD
CLFYLRDWEPSRLQALLQRCGVEFNTDPSNGTQTDACCVMEQKDEEGQQIDSPCGLQTQP
GQAGLCEKHYREYLVSLINAHSLDPSPLYEPNELIRTCERYLVDTQRADNEDDNGYNARL
LKKLMEVPLGEKVPRNK
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagccctgcgtcggtccagatggaggaggtccagaggagagccctgtcgctc
ctctcctcctcgggtttagcccaggatgtgaaggcggaggtccaggccatggccgccatc
ctcctgcctctgtcggagaagtaccgtcacttgggagtggaggccatgttgagggagaac
atggcctgccgcaacacacaggaggttctggagtctttgagtcgactggtcaaggccttg
agtatcctggagaagtacggctgtaacctgacgagtcccgccaggcccagatactggagg
agcgtcaagcacaacaaccccgtgttcaaaaccaccgtggatgccattaagggcggccgg
acagtcttgtttctgtacggttacaccaatcagcagatcgatggcctcagtttccccgac
gacgtcagcgaaccggacaccgcgaaagttgccgcggtgacgctggaggtcatgacctta
cgcacagaggtggacatgctcgttaagggcacccatcctcacccagaaaacttcagagat
atcatcccattcatcatccagcagggtcagctggtgcctgacgctgtggtcatcccgctt
ggagacgagcagcaggtcgtcaaaccccgggttccgtctcttccacctaagcccactctg
ggccccggaggacaacctctgaaaccgtcaacagtgagtaactgtaatctgtgcggcacc
tcctcgtctctggtttgcccgtcttgtgaaaatcaaactttctgcgacgagtgtgacaac
gtctttcaccgccacccctccagagccaatcacaagagagacaaaatacacaagacccaa
cagggaatttgcaccatctgtgggatttctgcggtgcacgctcagtgctccacctgcgtc
cagatgttgtgtgagaactgtgacaagcttttccactcacaccccgaccgcaaaggacac
aacagaacttttgttactccagccaaaacatccagtctttctctgtcgccgtgggagtgt
gctcactgcacgacggtgaacgagatgcgagccgtcctctgctcgacctgcgagcggcct
cgactcgccacggctgcttccaccgctcaagaaagcccgatgtcggtccctacatctccc
aacacagagtggcagtgtcagagctgcacagtcgtgaatcaaggcagcagcatcctctgt
gaggtgtgtgagcgcccccgtctggccactcggccacccgtcgcaccactgccgtccagc
cccggatccctgtctgactccggaacgaagtggatgtgcgagttctgtacctacgtaaac
accaatcccaccgtggtgtgcgagatgtgcaacctgtcctgcaaagactccgctggagtt
tctctgcctcagtctctccagcagactccgtccagcgccaaagaacaaccgacgctgagg
gtgaagccacaaccgaagcccagagtggacgtggaggtgaaaagacagaagatgatgagg
gaagacggcctccatctcgtccagcagatcagagaagcagaaaagcgcggcgtcagtgcc
gaggaggtctacgctgccatctgcatgtgcggcggcagcaacacgaacccctgtgattgg
ctgacgtcagagctgcctcacctgctggatgagatctgcgccatggcggcttccgtccag
gtggagagagacggcgaggaggcggagccgagcggtcccagtggcacaggggaaggcggg
aagctgtccagagccgaggccaagctggcctggctgtcggcgggaggagacaccgacaga
gccgtgagacagctgctgagagacagacaggtcaagatgaaggagctgcactctctgggc
ttcagagacgtgttgcggtgcgaggaggccctgaggctgagcggaggagaggtgaagggg
gctctgtctctgctgcagcgccccctgctggagcccttccaccagcgcatctggatcgac
cagcccgagccgccgatcgatcccaaacacccggacaaacagaggatgtgcagacgtctg
ctggcgctgtacgaactgcccagttgggggcgctgcgagctcgtcctctcgctgctccaa
gagccgggcgtcacctactccctggatgacgtagtgcaagcggtgaaagtgtcgcccgac
aaggacttcatcaagcgtctgctcatcaacgagtgtccctgctgtctgagcatcttcccc
cgcagcaagatgcagtcgctgacttcctgtcagtgctccgtctgccacgagtgcttcggg
cagcacttcaccatcaccgtgagagacaaacacatcagagacatggtgtgtcccgtctgc
agagagccggacatcaacgacccggaacaactggacagctacttctccacgctggacata
cagttacgcaactgcctggagccggacgtgtacgagctgtttcataaaaagctgaccgag
cacgccctgatgaaagacccaaagttcctgtggtgctgtcactgcacctccgggtttatc
aatgacggagaccagctgaaggtcacatgtccgtcctgccgaaggagtttttgcgctcag
tgcaagaaaccttgggagccccagcaccaggatctgtcctgtgagcagttccagcagtgg
aagagggacaacgatccggagtaccagaggcagggattggccggcttcctgagagacaac
ggcatcacctgtccttcctgcaggttccagtacgctctaaccaaaggcggctgcatgcac
ttcagctgctcccagtgcaggtaccagttctgcagcggctgcaacaacccgtaccacaag
acggtgtgtaagacgccccagtgcagttacaccggcctacatgctcatcacccgcgggac
tgtctcttctacctcagagactgggagccgtcccgactacaggccctgctgcagaggtgt
ggtgtggagttcaacacagatccttctaatggaactcaaactgatgcttgttgtgtgatg
gagcagaaagatgaagaaggtcagcagattgattcaccgtgtggcctccaaacacagccg
ggacaagctggactctgcgagaagcactaccgggagtacctggtgagcctgatcaacgct
cactctctggacccctcccccctctacgagcccaacgagctgatccggacttgtgagcgg
tacctggtggacacgcagagagcagacaacgaggacgacaacgggtacaacgcccgactc
ctcaagaaactgatggaggttcctcttggagaaaaagttcctcggaacaaataa
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