Anoplopoma fimbria (sablefish): 129110493
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Entry
129110493 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MARCHF6-like
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129110493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
afb04121
]
129110493
Enzymes [BR:
afb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129110493
Ubiquitin system [BR:
afb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
129110493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
129110493
NCBI-ProteinID:
XP_054478552
LinkDB
All DBs
Position
21:complement(19996967..20011067)
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AA seq
916 aa
AA seq
DB search
MDTAEEADICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRF
AFTPIYSPDMPSRLPIQDICAGLLTSVGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLF
TGSVSSLLTLPLDMLSTENLLADCLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQH
QPPPPNAAGQANEAQAAGQGAADEPPAAQPAPADPPAQNEAEPEPPDVPPDQGDDPELEE
EEEQXAEDADPNNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVVSLNTL
FILVFAFCPYHIGHFSVVGLGFEEYVQASHFEGLITTIVGYILLAMTLILCHGLAALVRF
QRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDASLKDRELSFKSAPGT
TMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEMIHLPIYRHLRR
FILSVVVFGSIVLLMLWLPIRLIKLLLPTFLPYNVMLYSDAPVSELSLELLLLQVVLPAL
LEQGHTRQWLKGLVRAWTVSAGYLLDLHSYLLGEQEDNDGNQPVNNNNNNNPPPGHHNNN
NNPAPAVGEGLHAAHQAILQQGGPVGFQPYHRPLRFPFRIVLLIAFMCMTLLVASLLCLT
LPVFTGRWLMSFWTGSSKIHELYTAACGLYVCWLSIRGITVLLAWMPQGRTVIARKVQEW
TLMILKTLVVALLVAGVIPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVLHAKII
AAITLMGPQWWLKTVIEQVYANGIRNIDLQFIIGKLAAPVISVLLLSLCVPYVIAAGVVP
AVVVTPEMEILMQRRIYPFLLMVVSLIGILSFQIRQFKRLYEHIKNDKYLVGQRLVNYER
KAARASSVPPPNPVAE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggataccgccgaagaagcggatatttgccgtgtgtgccgctccgaggggaccccagac
aaaccattgtaccacccatgtgtctgcactggcagtatcaagtttatccaccaggaatgt
ttggtccagtggctgaagcacagcaggaaggagtactgtgaattatgcaagcacagattt
gcgttcacaccaatctactctccagacatgccctcacgtctgcccatccaggacatctgt
gccggcctgctgaccagtgtgggcacggccatccgctactggttccattacacactggtg
gctttcgcatggctcggggtggttcctctcactgcatgtcgcatctacaagtgtctgttt
accggctctgtgagctcacttttgacactgccgctggacatgctctctacagagaacctg
cttgcagattgtctacagggctgcttcgtggtcacctgcacactgtgtgcattcatcagc
ctggtgtggctcagagaacagatagtccacggtggcgctcctcagtggttagagcagcac
cagccgccaccacctaatgcagccggacaagccaatgaggcacaagctgcaggccaggga
gcagctgatgagccccctgcagcccagccagccccagctgatccaccagcccagaatgaa
gcagagcctgagccccccgatgtccccccagaccaaggtgatgacccagagctggaagaa
gaggaggagcagncagccgaagatgctgaccccaacaacggagcacaagatgacatgaat
tggaatgctttggagtgggacagagcggcggaggagctcacctgggaaaggatgcttggc
ctggatggttcactggtatttttggagcatgttttttgggtggtgtctcttaacacactc
ttcatcctggtctttgcattttgtccctaccacattggccacttctctgttgtgggtctt
ggctttgaggaatatgtccaagcctctcactttgagggcttaatcacaaccattgtgggc
tacatactgctggcgatgacgctcatcctctgtcatggactggctgcactggtcaggttc
cagcgatcccgacgtctgctgggagtctgctacatcgttgtcaaggtctctctgctggtt
gttgtggagattggtgtttttccactcatctgtggatggtggcttgatatctgctcttta
gagatgttcgatgcctccctgaaagacagagagttgagttttaaatcagcccctggtacc
accatgttcctgcactggcttgtgggaatggtctatgtcttctactttgcttctttcatc
cttctcctgagagaggtgctgaggccgggagtgctgtggtttctgagaaacctcaacgac
ccagattttaacccggtgcaggaaatgatccacctgcccatctacagacacctgcggcgg
ttcatcctttccgtggttgtgtttggctctatcgtgctgctgatgctgtggctgcccatc
cggctgatcaaactactgctgccgaccttcctcccatacaacgtcatgctctacagtgac
gctccggtcagcgagctgtctttggagctattattacttcaggttgtgctgccagctctg
ttggagcagggacacactcgccagtggctcaaaggcctggtcagggcctggacagtgagt
gctggatatctattagacctccactcctacctcctcggggagcaggaggacaatgacggg
aaccaacctgtgaacaacaacaacaacaacaaccctcctcctggtcaccataacaacaat
aacaaccctgcccctgctgttggcgaggggctgcacgccgcccatcaggccattctgcag
caagggggaccagttgggttccagccctaccacagaccccttcgctttccattcaggatt
gtgttgctgatagcattcatgtgcatgactctgctggtggccagtctgctgtgcttaacc
ctaccagtgttcaccgggcgctggctgatgtccttctggacagggagctccaaaatccac
gagctgtacacggcagcgtgcggcctctatgtctgctggctgtctatccgcgggatcact
gtgctgctggcctggatgccccagggacgcaccgttattgcacgcaaagtccaggagtgg
acactcatgattctgaagaccctggttgtagctctgctggtcgctggagtcatccctctg
ctactgggcctgctgtttgaactggtcattgtggccccactcagggtccccctggaccaa
acaccccttttctacccttggcaggactgggctcttggagtgctccatgccaaaatcatc
gctgccatcactctgatgggccctcagtggtggctgaagaccgttattgagcaggtttat
gcaaacggcattcgcaacatcgatctccagttcatcatcggtaagctggcagctccggtc
atctcagtcctgctgctgtccttgtgcgtgccatacgtgatcgccgctggagtggtgcct
gctgttgtagttaccccagagatggagattctaatgcagaggagaatctacccgttcctc
ttgatggtggtctcgctcatcggcatcctgtctttccagatccgacagtttaaacgcctt
tatgaacacatcaagaacgacaagtacctggttgggcagaggcttgtcaactacgaacgc
aaagctgcaagagcgagctcagtcccgcccccaaaccccgtcgcagagtag
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