Anoplopoma fimbria (sablefish): 129110511
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Entry
129110511 CDS
T09102
Name
(RefSeq) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129110511
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129110511
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129110511
03029 Mitochondrial biogenesis [BR:
afb03029
]
129110511
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
129110511
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129110511
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129110511
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129110511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Arg_repressor
OS-D
DUF6778
Motif
Other DBs
NCBI-GeneID:
129110511
NCBI-ProteinID:
XP_054478568
LinkDB
All DBs
Position
21:9362147..9368610
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AA seq
676 aa
AA seq
DB search
MEEVLAPLREAVREQGDLVHQLKEKGANEQELSRAVSELKARKKILEAKELALQPKDDTV
DRVKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEID
CTMLTPEPVLKTSGHVDKFADYMVKDAKTGECFRADHLLKAHLKKLMSDEKCSQEKVTEM
EDVITQMDNYTQQELTDLFDKYNVKSPSTGNDLTPPVSFNLMFQTSIGPGGNTPGYLRPE
TAQGMFLNFKRLLEFNQGKLPFGAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPNE
KIHPKFSNVADLDILLFSSKAQTSGQSAQIRRLGDAVEQGVINNSVLGYFIGRIYLYLIK
AGLSKDKVRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRSCYDLTCHSRATKVP
LVAEKPLKEPKVVNVVQFEPNKGAIGTAFKKDAKLVLEYLAACDECYISDQEELLNEKGE
FSVETQGRTFKLTKDMVSVKRFQKTLHVEEFVPNVIEPSFGIGRIMYSIFEHSFRIRQGD
EQRTYFSFPATVAPYKCSILPLSQNQEFTPFVQQLSEAMTKNGVSYKVDDSSGSIGRRYA
RSDEIGVAFGITVDFDTVNKTPHTATLRDRDSMRQIRAEVAELPGMVRDLANGTLTWAEV
EKKYPVFEGQETSKKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtactggcgcctttaagggaggctgtgagggaacagggtgacttggtgcat
cagttgaaggaaaagggcgccaacgagcaggagctgagcagagctgtttcagaactgaaa
gcccggaagaagattcttgaagcaaaggagctagctttgcagcccaaagatgacacggtg
gacagagtgaagatggaggataccttaaagaggagattcttctacgatcaggccttcgcc
atatatggaggtgtgagcggcctgtatgactttggccctgttggctgcgccctgaagaac
aacatcctgcaggtttggaggcagcacttcatccaggaggagcagatcctggagatcgac
tgcaccatgctgacccctgagcctgtccttaagacgtcgggacatgtggataaatttgct
gactacatggtgaaagatgccaagactggagagtgcttccgcgccgatcacctcctcaaa
gctcacctgaaaaaactaatgtctgatgagaaatgctctcaagagaaggtgaccgagatg
gaggacgtaataactcagatggacaactacactcagcaggagctgacggacctctttgac
aaatacaacgttaagtctccctccacaggaaacgacctcacacctcccgtctccttcaac
ctgatgtttcagacgtccatcggcccaggggggaacacgcccggctatctgaggcctgaa
accgctcagggtatgttcctgaacttcaaacgcttgctggagttcaaccagggaaaactt
cccttcggtgccgctcagattggaaactccttcaggaacgagatctctcctcgctctgga
ctcattcgcgtcagagagttcaccatggctgagatcgagcactttgtggacccaaacgag
aagatccaccctaagttctccaacgtggcagacctggacatcctgttgttctcctccaag
gctcagaccagcggccagtctgcacaaatcaggaggctgggtgacgctgtggagcaggga
gtgatcaacaattcagtgttgggttacttcattggaagaatctacctctatctcatcaaa
gcagggctctctaaggataaagtgcgtttccgacagcacatggaaaacgagatggctcac
tacgcatgtgactgctgggacgccgagtccaaaacctcctatggttggattgagatcgtg
ggctgtgctgaccgctcttgctatgacctcacgtgtcactccagagccaccaaggtgcct
ctcgtggctgaaaagcccctgaaagaacccaaagtggtaaacgttgtccagtttgagccc
aataagggagccataggaaccgccttcaagaaagatgccaagttggttctggagtacctg
gccgcctgtgacgaatgctacatcagtgatcaggaggagctcctcaatgaaaagggggag
ttcagtgttgagacacaaggaagaacatttaagctgaccaaagacatggtcagcgtgaag
aggttccagaaaactctgcacgtggaggagtttgttcccaatgtaatcgagccgtccttt
ggcatcggcagaatcatgtactccatctttgagcactcgttccgcatccgacagggggat
gaacagaggacgtatttcagcttccctgccactgtagctccatacaaatgttccatcctg
cctttgagccaaaaccaggagttcacaccatttgtccagcagttatctgaggcgatgact
aaaaacggcgtgtcctacaaagtggacgactcctcaggatccatcgggaggcgttacgcc
cgctccgacgagatcggagtggcgtttggcatcactgttgacttcgacacggtgaacaag
acgcctcacacggccacgctgagagaccgagactccatgaggcagatcagggccgaggtc
gctgagttgccagggatggttcgagatctggctaacggcaccttgacgtgggctgaggtg
gagaaaaagtaccccgtctttgaaggacaagagaccagcaagaaggagtag
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