Anoplopoma fimbria (sablefish): 129110536
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Entry
129110536 CDS
T09102
Name
(RefSeq) glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129110536
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
afb01007
]
129110536
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
afb03016
]
129110536
03029 Mitochondrial biogenesis [BR:
afb03029
]
129110536
Enzymes [BR:
afb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
129110536
Amino acid related enzymes [BR:
afb01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
129110536
Transfer RNA biogenesis [BR:
afb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
129110536
Mitochondrial biogenesis [BR:
afb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
129110536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
OS-D
DUF5915
EcoRII-C
DUF6778
Motif
Other DBs
NCBI-GeneID:
129110536
NCBI-ProteinID:
XP_054478599
LinkDB
All DBs
Position
21:complement(9352341..9359768)
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AA seq
746 aa
AA seq
DB search
MLRSAASALLRTSTEISAHSPVSTVRFVRQSLRYAPQKRPFSTSVCLCKKKKQSLWLEEG
RTMDGNMEKILAPLRVAVKEQGDLVRQMKQDGAPDVDVTKAVAELKARKRTLEAKELSLQ
PKDDIVDRSKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRHHFIQEE
QILEIDCTMLTPETVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKKCAA
EKKAEMEEVTTQMDNYTQQELTELFGKYNVKSPTTGNDLTPPISFNLMFQTSIGPGGNMP
GYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEH
FVDPNEKVHPKFSNVADLDLTLYSSKAQTSGQSAHIMRLGDAVEQGVINNSVLGYFIGRI
YLYLTRVGIAKDKLRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCFDLQCHA
RATKVPLVAEKPLKEPKIVNVVQFEPNKGAIGKAYKKDAKIAMEYLSVCDECFITEQEKL
LNETGEFTIESEGKSFKLTKEMVSVKRFQKTLHVEEVVPNVIEPSFGIGRIMYTIFEHTF
HVREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFMPFVKELSEAMTKNGVSYKVDDSAGS
IGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPLIIRDLANAT
LTWAEVEIKYPIFEGQETSKKDTAEE
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcagcgcagcatcggcactgctgaggaccagcactgagatctccgcacacagt
ccggtgtctacggtccggttcgttcggcagtcgctccgctacgccccccaaaaaaggccg
ttttcaacgtcggtctgcttgtgtaagaagaagaaacaaagcctgtggctggaggaagga
cgaaccatggacggaaacatggagaagatcctcgcccctttgagggttgcagtcaaagaa
cagggggaccttgtgcgccaaatgaaacaggatggagctcctgatgtggatgttactaaa
gctgtggctgaactgaaggcaaggaagagaaccctggaggccaaggaactatcactacaa
cccaaagatgacatcgttgacagatcaaagatggaggataccctcaagaggcgattcttc
tacgaccaggcctttgccatctatggaggtgtgagcggcctgtatgacttcggccctgtg
ggctgcgccctgaagaacaacatcctgcaggcctggaggcatcacttcatccaggaggag
cagattctggagatagactgcaccatgctgacccctgagactgtcctcaagacttcagga
cacgtggacaaatttgctgactacatggtgaaagatgtcaagaatggtgaatgcttcagg
gctgaccacctcctcaaagcccacctccagaagctgatgtctgataagaagtgtgcggca
gagaagaaggctgagatggaggaagtcaccactcagatggacaactacactcagcaggaa
ctgactgagctctttgggaaatacaacgtcaagtcacccaccacaggaaacgacctcaca
cctcccatctccttcaacctgatgtttcagacgtccatcggaccaggggggaacatgcca
ggctatctgaggcctgaaactgctcagggaatcttcctcaacttcaaacgtctattagag
tttaaccagggaaagcttcccttcgctgctgctcaaataggaaactccttcaggaacgaa
atctctcctcgctctggactcattcgtgttagagagttcaccatggctgagatcgagcac
tttgtggatccaaatgagaaggtccaccctaagttctccaatgtagccgacctggacctc
actttatactcctccaaggctcagaccagcggccaatctgcacacatcatgaggctgggt
gacgctgtggagcagggagtgatcaataactccgtcctgggatatttcatcgggaggatc
tacctctaccttactagagttggtatcgccaaagacaagctgcgtttccgacagcacatg
gacaacgagatggctcactacgcctgtgactgctgggacgctgaagccaaaacctcatac
ggctggatcgaaatcgtggggtgtgccgaccggtcttgctttgatctgcaatgccatgcg
cgagctacaaaagtccctttggtcgctgaaaagcctctaaaagaacccaaaattgtaaat
gtcgtccagttcgagccaaacaaaggtgccattggaaaggcgtataagaaggacgctaag
atagccatggagtatctgtctgtgtgtgacgagtgcttcatcacagaacaggagaagctg
ctcaatgagactggagagttcaccatcgagtcagaaggcaaatccttcaaactcaccaag
gagatggtcagtgtgaagcgattccagaagactctgcatgtggaggaagttgttcccaat
gtaatcgagccctcctttggcatcggtaggatcatgtacaccatctttgagcacacattc
catgtcagagaaggtgatgaacaaagaacgtacttcagcttcccagctactgtagctcca
tacaaatgttctgtcctgcctctgagtcaaaaccaggaattcatgcccttcgtgaaggag
ttatctgaggcgatgaccaaaaacggtgtttcttacaaggtggacgactctgcaggatcc
atcgggaggcgttacgcccggacggacgagatcggagtggcgtttggcatcaccatcgac
ttcgacacggtgaacaagacgccccacacggccacgctgagagaccgagactccatgagg
cagatcagggccgaggtcagtgagttgcctctgattattcgggatttggccaacgccacg
ttgacctgggctgaagtggagatcaagtacccgatctttgaaggacaggagaccagcaag
aaggacacagctgaagagtaa
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