Anoplopoma fimbria (sablefish): 129110543
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Entry
129110543 CDS
T09102
Symbol
ptbp2a
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129110543 (ptbp2a)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129110543 (ptbp2a)
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_ACIN1
RRM_PARP14_3
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
129110543
NCBI-ProteinID:
XP_054478611
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All DBs
Position
21
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AA seq
518 aa
AA seq
DB search
MDGISDVAVGVKRGSDELSMYNSPNSGVSSISDGASNGSDSKKPRVEEAPPSRVLHIRKL
PNEASETEVIALGLPFGKVTNILTLKGKNQAFLEMGTEEAAITMVNYYNTVNPHIRNVPV
FIQYSNHKELKTDSGNQRTQAVLQAVSAVQSGGSPSSDVQEALAAASSPVLRIIIDNMFY
PVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLALDGQNIYNSCCTL
RIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDSSVAAAFSKDSNSLLGKIPGALN
PLSAAAAAAAAAGRVALAGQAGSSGVLLVSNLNEEMVAPQSLFTLFGVYGDVQRVKILYN
KKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRVTLSKHQTVALPRDGLDDQGLTKDFAN
SPLHRFKKPGSKNFQNIFPPSATLHLSNVPQDVTEEDLRLLFSNAGGTVKAFKFFQDRKM
ALIQMSTVEEAIQALIDLHNYNMGGNQHLRVSFSKSTI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatcagtgatgttgcagttggagtgaagaggggatcagatgagctgagtatg
tacaacagtcccaactctggcgtgagcagtattagtgatggggcttccaatggcagtgac
agtaaaaagccgagggtggaggaggccccgccgtctcgtgtgctccacatcaggaagctg
cccaacgaggcctcggagacagaagtcatcgccttgggcttgccttttggtaaagtcacc
aacatcctcacactgaagggaaagaaccaggctttcttggagatggggacagaagaggca
gcgatcactatggtcaactactacaacactgttaatcctcacatccgcaacgtccctgtg
tttattcagtactccaaccacaaagaactcaaaaccgattccggcaatcagcggacccag
gcggtgcttcaggcggtgtcagcagtccagtccggcgggtcaccaagctcggacgttcag
gaggctctcgccgcagcctccagtcccgtgctgcggatcatcatcgataacatgttctac
cccgtaacgctggatgtactgcaacagattttctccaagtttggcacagttatgaagata
atcacattcaccaagaataatcagttccaggcccttctgcagttcagcgatcctgtcaat
gcacagcaggccaaactggccctggatggccagaacatctacaattcttgctgcacgctg
cgtatcgacttctcaaagctggtcaacctaaacgtcaagtataacaacgacaagagtcgc
gactacacgcgacccgagctgcctgccggtgacggccagccaagcctcgactcctcggtg
gccgccgccttcagcaaagactccaactccctcctcggtaagatcccaggagccctgaac
cctttgagtgcagcggcggctgctgctgctgctgcaggcagggtggcgcttgctggacag
gcggggtccagtggggtcctgctggtcagcaacctcaatgaggagatggttgcgccccaa
agtctgtttaccctcttcggggtgtacggcgatgtccagagggtgaaaattctgtacaat
aagaaggacagcgctcttattcagatgtcagacgccaaccaggcccagctagcgatgagc
cacttgaacggccaaaagatgtacgggaagatcatccgggtgacgctgtccaagcatcag
accgtggcgctgcctcgggacggcctggacgaccagggcctgaccaaggacttcgccaac
tccccacttcaccgcttcaagaaacccggctccaagaatttccagaacatcttccctcca
tcggccaccctccacctctccaacgtcccacaagacgtgacggaggaagacctgcggctg
ctcttctcaaacgctggaggaactgtgaaagcattcaagtttttccaggatcgcaaaatg
gctctgatccagatgtcgacagtggaagaggccatccaggctttgattgaccttcacaac
tacaacatgggaggaaaccagcacctgagagtctccttctcaaagtccaccatttaa
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