Anoplopoma fimbria (sablefish): 129110558
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Entry
129110558 CDS
T09102
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129110558 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129110558 (prpf4bb)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129110558 (prpf4bb)
Protein kinases [BR:
afb01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
129110558 (prpf4bb)
Spliceosome [BR:
afb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
129110558 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
CoV_S1_C
Pkinase_fungal
CSTF_C
Motif
Other DBs
NCBI-GeneID:
129110558
NCBI-ProteinID:
XP_054478629
LinkDB
All DBs
Position
21:6118956..6128392
Genome browser
AA seq
1026 aa
AA seq
DB search
MADVEMDIASTRMNNGNEHVKQDLESQEKSANEDSGEMSEEEEEEEEEEEEAEAEANGQK
TEEGPKHHSSSGKHKRKKHKHRSKHKKHKHASDEDKDRKRKHRHKHRKHKRKEGASPSAA
ALFASSGHKKVESSPSSGNPSLDDRALLEDLEKRRAMIKAELDSQLMEGKVQSGMGLILQ
GYNSGSEEDGDGRIRNGEQRQRTSSGKPISPRGVKGGKSRRDSTEGSKTSAKRRSRSKSA
ERLGQAKESKHDKVTKTTKDTAGKDRGRGRSRSKDRKPSDSTDRSKDRAGKSNSPTTTWR
AEQKGGRADKRPSPQRDDRPNQERPGRRSRSPGRERPSRSDADRDKRPAKSPSKDASSGK
ENRSPHRRGPHSPMRKRSASPRHRDAHHPPAGAMDRTTKQSHSPPKTRSPPRRPRSRSPD
VRRRDADRQDSPMRKRLRPDAGPGRDWSRDNSPRLGARRRMSRSPLRRRSMSPRRRSRSS
PRRRSRSPLGHRSGERDRYGRLRQYRRSMSRDRDRRRRRSRDEDKFKGSLSEGMKVDKES
SEEEVLEDFDGEEVDEEALIEQRRQQRLAIVQKYKVVNDDSNMVSEPSSPQSSTRSRSPS
PDDILERVAADVKEYERENLNTFEASIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFA
ADFDSARMRAAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGQGVFSNV
IRARDTARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQ
HLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNI
LVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLLE
LYTGKILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTERE
KVTVMSTINPTKDLLIDMIGGQRLPEDQRKKVMQLKDLLDGTLMLDPAKRISINQALQHP
FIQEKI
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgagatggacatcgcgtccacaagaatgaataatggcaacgaacacgtg
aagcaggatctggagagccaggaaaaaagtgcaaatgaggacagcggagaaatgtcggag
gaagaagaagaagaagaggaggaggaagaggaggcagaggccgaggctaacggccagaag
acagaagaggggcccaaacatcacagcagcagcggcaaacataagaggaaaaaacacaag
catcgtagtaagcacaaaaaacacaagcatgcctctgacgaggacaaggaccgcaaacgc
aagcatcgtcacaaacacaggaaacacaaacgcaaagagggcgcctctccctctgctgcc
gccctctttgcctcctccggccacaaaaaagttgaatcctctccctcctctggaaatccg
agtctggatgacagggccttgctggaggacttggagaaacggagggccatgatcaaagcc
gagctggacagccagttgatggagggcaaggtccagtcaggaatgggccttatcctccag
ggatataactctggatctgaagaagacggagatggcaggatcagaaatggagaacagcgt
caaaggaccagctcaggtaaacccatatctcccagaggagtgaaaggagggaaatctaga
cgggactcaacagagggcagtaagaccagcgccaagcgccgcagtcggagtaagtctgca
gagaggctaggacaggccaaggagtccaagcacgacaaggtgaccaaaaccaccaaggac
acagctggtaaagacagaggccgcggcaggagccggtcgaaagacagaaagccctcggac
agcactgataggtccaaggacagagccgggaagtccaactcccccaccaccacctggaga
gcagagcagaaaggcggccgcgctgacaaacgtccctctccacagcgggacgacagacca
aaccaggagagaccgggccgccggtccagatcacctggacgagaacgaccaagccgctcg
gatgctgaccgggacaaacggccagccaagtccccgtccaaggatgcgtcgtcggggaag
gagaaccgctccccccacagacgggggcctcacagccccatgaggaaacgcagtgcttcg
cctcgccacagagatgcccaccaccctccggccggcgccatggacaggacaacgaaacag
agccactctccacccaaaaccaggtctccccccaggagaccgcgcagccgctcaccagac
gtcaggaggagggatgctgacaggcaggactcgccaatgaggaagcgcctccggccagat
gcggggccaggcagagattggtcacgtgacaacagtccaagattaggcgctcgccgcagg
atgagtcgttcgcctttaagacggaggtcgatgtcaccacgacgacgctcccggtcttcc
ccccgcagacggagcaggtctccacttggacacaggtctggggagagagaccggtatggg
cggctcagacagtaccgacggtcaatgtcccgcgatcgggataggagaagaagacgcagc
agagatgaggacaagttcaagggaagcctttcagagggcatgaaagtggacaaggagtcc
tcagaggaagaagtgttggaggactttgatggagaggaggtcgatgaagaagctctcatt
gaacagcgccggcagcagcgtttggccatagtccagaaatacaaggttgtgaatgacgac
agcaacatggtgtcggagcccagcagccctcagagcagcacgcgcagccgatcaccctcc
cccgacgacatcctggagcgagtagccgcagacgtcaaggagtacgagcgcgagaacctg
aacacctttgaggccagcatcaaagccaagcacaacctcatcgcccaggagaaagacgga
gccaacccaaagaagccttcagcccccgacatgttcacagagtcggacgacatgtttgct
gctgactttgatagtgccaggatgagagcagcaggtgtagggaaggacttcaaggagaac
cccaacctgagggacaactggactgatgctgagggctactaccgggtgaacatcggggag
acactagacaagcgctacgacgtctacggctacaccggccagggtgtcttcagcaacgtg
atcagagccagggacactgccagggccggccaggaggtggcggtcaagatcatccgaaac
aatgagctcatgcagaagaccggattgaaagagttagaattcctcaagaagctgaatgac
gccgatcctgatgacaagttccactgccttcgcctcttcaggcacttctaccacaagcag
catctctgcctggtatttgagcctctcagcatgaatttgcgagaggtcttgaagaaatac
ggtaaagacgttgggctccacatcaaggccgtgcgctcctacagtcagcagctctttttg
gctctcaagctgctgaaacgatgcaacatactccacgccgacatcaagccggacaatatc
ctggtgaatgagtcaaagactattctgaagctttgtgacttcggttctgcgtcccatgtt
gctgacaacgacatcacaccgtacctggtcagcagattctacagagctccagagatcatc
ataggaaagccgtacgactatgggattgacatgtggtctgttggctgcactttattggag
ctttacactggcaaaatcctgtttcctggatcctccaacaatcacatgatcaaactagct
atggacctcaagggcaagatgcccaacaagatgatccgtaaaggcctcttcaaagaccag
cacttcgatcagaacctgaacttcctctacattgaagtagacaaagtgacggaaagggag
aaggtgacggtgatgagcaccatcaaccccaccaaagacctgctgatcgacatgatcgga
ggccagcgactgcccgaggaccagaggaagaaagtgatgcagctgaaggacctgctggac
ggcaccctgatgctggacccagccaaacgcatcagcatcaaccaggctctgcagcacccc
tttatccaggagaagatctga
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