Anoplopoma fimbria (sablefish): 129110565
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Entry
129110565 CDS
T09102
Symbol
smarcd3b
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129110565 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
afb03021
]
129110565 (smarcd3b)
03036 Chromosome and associated proteins [BR:
afb03036
]
129110565 (smarcd3b)
Transcription machinery [BR:
afb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129110565 (smarcd3b)
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129110565 (smarcd3b)
PBAF complex
129110565 (smarcd3b)
GBAF(ncBAF) complex
129110565 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
129110565
NCBI-ProteinID:
XP_054478642
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All DBs
Position
21:complement(6577396..6604097)
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AA seq
484 aa
AA seq
DB search
MATEETXGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSTVMEPSRKRPAPSQQVQQQQQQQQQQQQAVGGRARNAKRRKMADKILPQRIRELVPES
QAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPARPDADDSDGSI
ASWELRVEGKLLDDPGKQKKKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQ
VKRPGDVSVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDS
HDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHVISVDPNDQKKTACYD
IDVEVEDPLKGQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGY
IQDWLKSQSRDLKLMTDVVGNPEEERRAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALA
VRNT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccacggaggagacgngcgggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcctggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggaccaccgtacggagggagcccggcggtgcggcctggttta
ccctccacggtgatggagcccagccggaagaggcccgccccctcccaacaggtccagcag
cagcagcagcaacagcagcagcagcagcaggccgtaggaggccgggctagaaatgctaag
agaaggaaaatggcagacaagattcttccgcaaaggatccgtgagctggtcccagagtct
caggcctacatggatctgctggcgtttgagcgcaaactggaccagaccatcatgcgcaaa
cgtgtggacatccaggaagcactgaagagaccaatgaagcagaagcgtaaactgaggctt
tacatatccaacaccttcaaccctgccagacccgacgctgatgactcagacggcagtatt
gcatcgtgggaactgcgggtagaggggaagttgctagatgatccggggaagcagaagaag
aagttctcttcgttctttaagagtctggtgattgagctggacaaagacctgtacggtcct
gacaaccacctggttgagtggcaccgcacgccgaccacccaggagacggacggcttccag
gtgaagaggccgggcgacgtgagcgtacgctgcactctgctgctgatgctggactaccag
cctccccagtttaagctggaccctcgcttggctcgcctgcttggcattcacactcagact
cgctcctgcatcatccaggccctctggcagtacgtcaagaccaacaagctgcaggactcc
catgacaaggagtacatcaactgtgacaagtacttccagcagatctttgattgccctcgg
ctgaagttctctgagatccctcagcgcctcaccaacctcctcttaccccccgaccccatc
gtcatcaaccacgtcatcagcgtggatcccaacgaccagaagaagacggcctgctacgac
atcgacgtggaggtggaggatcccctgaagggccagatgagcagcttcctcctctccacg
gccaaccagcaggagatcgcctcactggacaacaagatccatgagaccatcgagtccatc
aaccagctgaagatccagagggacttcatgctcagtttctccagagatcccaagggctac
atccaggactggctcaaatcccagagccgagatcttaagttaatgacagacgtggtgggg
aaccctgaagaggagaggagggcggcgttttaccacgagccctggtcccaggaggccgtc
agccgctatttctactgcaagatccagcagaggagacaggagctggaacaggccttagct
gtccgcaacacctaa
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integrated database retrieval system
