Anoplopoma fimbria (sablefish): 129110609
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Entry
129110609 CDS
T09102
Symbol
spata13
Name
(RefSeq) uncharacterized protein spata13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129110609 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129110609 (spata13)
Membrane trafficking [BR:
afb04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129110609 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
129110609
NCBI-ProteinID:
XP_054478713
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All DBs
Position
21:21860209..21874993
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AA seq
1282 aa
AA seq
DB search
MSRAEQQDRVLSTSEDSLPSLHNSRAEPLIRSRPLSDIYPFHSHTDRSVVPCLLSGYGAQ
VQPVTAGPDENRLNGINSSSWSNPVIGQPEGKPYSSRIMRLFSNSRKGPLPAHSPTTDSA
ASTHSNDGNSVPQSWSGLSGLGVVDSFKKLRSSVLQGIQSRGAVGQDGEQDPSDQEMANG
TGVADINPGLDDAENDFKFADGYSGSNGNFDGQKFAEMSHRGSDIEDFDDEENGDGDGLT
RNTRCSRSIRRAYGAGRISLLDTGNRRIAGKSTNEATDSRKPDETSSINVQTKNTNENTN
VKVLSRLSKSAENIHIFKVPFRRKAPSPGPPLLQEDTQRTIASNGTQNIQRTASASSVDL
RGLGVGRRKSPVMTKGPMLVGSRTDLTVRRKRSPSPSTTSPSPLSPLTRLHDDYSRRVPC
LTTSERQRRPSPVRARVMSVGRTPLVHLQPECTDSPQQHQVLISPVSVEPPEGTEQTSPG
SSAHYESLTVATTGGSKPRAECDPSPLSQEEPSQQEDQTEVNVQPNEATSDQQEPEALLQ
TDEVSPTTSSTPPISPTCLSESPTSPSSSSTDASTEISQVKPRRRSGRPRPRPISDYGQH
ISRKHCIPEEGAELHAEERTANTLLHKDCSGNEACGNGASPENRIANGDVEGVRQRPISV
IGVVDLFSPDTEEKDDRLPSSLSRPPIPSHQVPPYRAVSARFRPSTLSQSTPIGLDRVGR
RKLHRMLSDGVSKCSATLDDSVSEEEEGSFDELADVTPYLQPGVELSVLNEWISSGHTVY
AEALWDHVTMEEQELAFKAGDVIRVLDASDKDWWWGRGADKEAWFPSSFVRVRVNQEDSS
TESVESVADQEDPAPRDTHSTQHKEQMRTNVVQEIMNTERIYIKHLKDICEGYIRQCRKH
PDMFTELQLKTIFSNIEDIYRFQRQFLKDLEKKYNKDQPHLSEIGSCFLLQGEGFSIYSD
YCNTHPSACAELQRLMKSGKYKHFFEACRLLQQMIDISIAGFLLTPVQKICKYPLQLGEL
LKYTPKDHSDYSGVSKAYEAMKNVASLINERKRRLESVDTIAHWQVAILHWEGPDVLERS
SDLIHSGELTRVVRQGKMQQRSFFLFDHQLVFCKKDVLRRDLLHYRGRLDMDQTEVVDVP
DGRDLDLGLTLRNALRLRNASTLEFVCVLCCRKAQDKQRWLQAFAKERYRVKEDQEMGME
ISEEQRKQAIVNARRAKQKKSKNIGYSGSVPPHHQNLHPLHQRHITIPTSVPQQQVFSLA
EPPKRKPYHLLYSITRNTFFKK
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggcagaacaacaggacagggtcttgtccaccagcgaagactctctcccgtcc
ctccacaactctagagctgaacctctgatccgaagccgacccctcagtgatatataccca
ttccacagtcacactgacagaagtgtagtcccatgtctgctgtctgggtatggcgcccaa
gtacagccggtgactgcaggtcctgacgaaaaccggttgaatggcatcaactcctcctcc
tggtccaaccctgtcataggtcaaccagagggaaagccgtattcctcaagaattatgagg
cttttttctaactcgaggaagggccctctccccgctcacagtccaaccactgacagtgcc
gcctcaacccacagcaacgacggcaacagcgtaccccagtcctggtcaggactatcggga
ctgggcgtcgtggactccttcaagaagctccgctcctctgtgctccagggaatacagagt
agaggagcagttggccaagatggagaacaagacccatcagatcaggaaatggctaatggc
acaggtgtggcggacattaaccctggtctagatgatgcagaaaatgatttcaagtttgca
gacggatacagtgggtctaatggtaattttgatggccaaaagtttgctgagatgagccac
cgtggatcggatattgaggactttgatgatgaggaaaatggtgacggagacggtctcaca
cgcaacacgcggtgctcaaggagcatcaggagagcgtatggagcaggacgcatctcttta
ctggacacagggaataggaggatagcaggaaaaagcacaaatgaggctacggacagtcga
aaaccagatgagacatccagcatcaacgtccaaacaaagaacacgaatgagaacacaaat
gtgaaggtgctgagcagactgagcaaaagtgcagaaaatattcacatatttaaggtgcct
ttcagacgcaaagctccatctccaggacctcctttgcttcaggaggacacccagaggact
atcgcgtcaaacgggacacaaaacatccagaggacagccagcgcctcctcagtggatctc
cggggcctcggcgttggccgcaggaagagccccgtgatgaccaaagggccgatgctagtt
ggcagcaggaccgacctgactgtcagacgcaagcgaagtccctccccaagcactacctct
ccatccccgttgtcacccctgacccgtctccatgacgactactcccgccgcgtgccttgc
ctgacaaccagtgagcgacagcgccggccctcgcccgtcagagcccgggtcatgtctgtc
ggacgcacccctctggttcatctgcagcctgaatgcactgacagcccccagcagcaccag
gtcctaattagcccggtttctgtggagcccccagagggaacagagcagacctcacctggt
agctctgctcattatgaatcgctcactgtggccacaacaggtggttctaaaccgagagca
gaatgtgatccatctcctcttagccaggaagagccttcccaacaagaggatcagactgaa
gtcaacgtgcaaccaaatgaggcgacatcagaccaacaagagccagaagcacttctccaa
acagatgaagtctctccaacaaccagcagcacccctcctatctctcctacatgcctctca
gagtcgcccacatcgccctcatcatcctcaaccgatgcatccacggaaatatcccaggtc
aagcccaggcgaaggagcggacgcccgagacctcgtcccatttctgactacgggcagcac
atttccaggaagcactgtattccagaggaaggggcagaactgcatgctgaagaaaggaca
gcaaacacattgctgcataaagactgcagtggtaacgaagcatgtgggaacggagcgagc
cctgagaaccgcatcgcaaacggagacgttgaaggcgtgaggcagcgtccaatctcagtg
ataggagttgttgatctgttctctcctgatactgaggagaaagacgaccgccttccttct
tccctgtcgcggccgcccatcccctcccaccaggttcccccctacagagccgtgtctgcc
aggtttcgaccctccaccctctcccagagcacccccatcggactagaccgcgttgggcgg
cgtaagctccacagaatgctcagcgatggtgtgtctaagtgctcagcgacacttgatgac
agcgtgagtgaggaggaggagggcagctttgacgagctcgctgatgtcacgccctacctc
cagccaggggtggaactctctgtgctcaacgagtggataagctccggccacacagtgtat
gctgaggctctctgggaccatgtgaccatggaggagcaggagctggccttcaaggctgga
gatgttatccgtgtcttggatgcctcggataaggactggtggtggggcaggggtgctgac
aaggaggcctggttcccctccagctttgtgagggtgcgagtgaaccaggaggactcgagt
acagaaagtgtggagagtgtagcggaccaggaagatccagctccaagggacacacacagc
actcagcacaaggagcagatgagaaccaatgtggttcaggaaatcatgaatactgaacgc
atctacatcaagcacctaaaggacatctgtgagggttacatccgtcaatgccgtaaacac
ccggacatgttcactgagctgcagttgaagaccatcttcagcaacatagaggacatctac
aggtttcagaggcagtttctcaaagacctggagaagaagtacaacaaagaccaaccacat
ctcagtgaaattggctcttgttttctcttgcagggcgagggcttttctatctactccgac
tattgtaacacgcatccgtcagcctgtgctgagctgcagcgcctcatgaagtccggcaaa
tataagcatttctttgaggcctgccggctcctccagcagatgatcgacatttccattgca
ggtttcttgctcacgcctgtccagaagatctgtaaataccccctacagctaggagaactg
cttaagtacacccccaaagaccacagtgactacagcggagtgagcaaagcgtatgaggct
atgaagaatgtggccagtttgataaatgagaggaagaggcggctggagagcgtcgacacc
atcgctcactggcaggtggccattctacactgggaggggcctgatgtgctggagcgcagc
tcagacctgatccactctggtgagctgactcgagtcgtccgacaaggcaaaatgcaacag
cgcagcttcttcctgtttgaccaccagctggtcttctgtaaaaaagacgtcctgcgcaga
gacctgctccactaccgcggacggctggatatggaccagaccgaggttgtggatgtgccc
gatgggcgggacctagacctgggcctgaccctgaggaatgctctgcgcctgcgcaacgcc
tccactctggagtttgtgtgtgtgctgtgctgcaggaaggcccaggacaagcagaggtgg
ttacaggcctttgccaaggagagatacagagtcaaggaagaccaagagatgggaatggag
atcagtgaagagcaaagaaaacaggccattgttaatgccagaagagccaaacagaagaag
agcaaaaacattggttactctggctctgtcccgccacaccaccaaaaccttcacccactt
caccagcgtcacatcaccatccccaccagcgtgcctcagcagcaggtcttttcactggcc
gagcccccaaaacgaaagccttatcacctgttgtacagcatcacccgcaacacctttttc
aagaaatga
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