KEGG   Anoplopoma fimbria (sablefish): 129110735
Entry
129110735         CDS       T09102                                 
Name
(RefSeq) cullin-1
  KO
K03347  cullin 1
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04110  Cell cycle
afb04114  Oocyte meiosis
afb04120  Ubiquitin mediated proteolysis
afb04141  Protein processing in endoplasmic reticulum
afb04310  Wnt signaling pathway
afb04340  Hedgehog signaling pathway
afb04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:afb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129110735
   04120 Ubiquitin mediated proteolysis
    129110735
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    129110735
   04340 Hedgehog signaling pathway
    129110735
   04350 TGF-beta signaling pathway
    129110735
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129110735
   04114 Oocyte meiosis
    129110735
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:afb04121]
    129110735
Ubiquitin system [BR:afb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Cullin
     129110735
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 IntS11_C
Other DBs
NCBI-GeneID: 129110735
NCBI-ProteinID: XP_054478902
LinkDB
Position
21:2475261..2501177
AA seq 776 aa
MSSNRTQNPHGLKQIGLDQIWDDLRAGIQQVYTRQSMAKSRYMELYTHVYNYCTSVHQSS
QGRGSVPPAKPSKKSTTPGGAQFVGLELYKRLKEFLKNYLTSLLKDGEDLMDECVLKFYT
QQWEDYRFSSKVLNGICAYLNRHWVRRECDEGRKGIYEIYSLALVTWRECLFRPLNKQVT
NAVLKLIERERNGETINTRLISGVVQSYVELGLNEEDAYAKGPTLSVYKEYFECQFLTDT
ERFYTRESTEFLQQNPVTEYMKKAEARLLEEQRRVQVYLHESTQDELARKCEQVLIEKHL
EIFHTEFQNLLDADKNEDLGRMYNLVSRITDGLGELKKLLETHIHNQGLAAIEKCGEAAL
NDPKVYVQTTLDVHKKYNALVMSAFNNDAGFVAALDKACGRFINNNAVTRMAQSSSKSPE
LLARYCDSLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYAKMLAKRLVHQNSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNEQFKKHLTNSEPLDLDFSIQVL
SSGSWPFQQSCTFALPSELERSYQRFTAFYASRHSGRKLTWLYHLSKGELVTNCFKNRYT
LQASTFQMAILLQYNTEDSYTVQQLTDSTQIKTDILVQVLQILLKSKLLVMEDENANVDE
VDFKPDTVIKLFLGYKNKKLRVNINVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMK
MRKVLKHQQLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGEKDTYSYLA
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgtcgtcgaacaggacccagaacccccacggactgaaacagataggcctggaccagata
tgggacgacctgcgggctggcatccagcaggtgtacacacggcaaagcatggccaagtcg
cgctacatggaactctacacacatgtatataactattgtaccagcgtccaccagtccagc
cagggccggggctcggtgccgccagccaagccctccaaaaagtccaccactccgggtggg
gctcagtttgtaggcctggagctctacaagcggctcaaagagttcctgaagaactacctg
accagcctgctcaaggatggcgaggatctaatggacgagtgtgtgttgaagttttacacc
cagcagtgggaggattaccgtttctctagtaaggtcctcaacgggatctgcgcctacctc
aaccgccactgggtcagacgagagtgtgacgagggacgcaagggaatctatgagatttac
tcgctggcactagtgacctggagggagtgtttattccgacccctcaacaaacaggtaaca
aacgctgtgctgaagctgatagagagagagaggaatggggagaccattaacaccagactg
atcagcggtgtggtccagtcttatgtggagctgggtctgaacgaggaggacgcctacgcc
aaaggccccacgctgtctgtgtacaaagagtactttgagtgtcagttcctcacagacacg
gaacggttctacacacgtgagagcacagagttcctgcagcagaaccccgtcaccgagtac
atgaagaaggcggaggctcgtctgctggaggagcagcggcgtgtgcaggtttacctccat
gaatccacccaggacgagctggccaggaagtgtgagcaggtcctcatagagaaacacctg
gagatcttccacacggagtttcagaaccttctggacgccgacaagaatgaagacctcggc
cggatgtacaacctggtgtcgcggatcacagacggtctgggcgagctgaagaaacttcta
gagacccacatccacaaccagggcctggccgccatcgagaagtgtggcgaggcagcgctc
aacgaccccaaagtgtacgtccagaccaccctggacgtccataagaagtacaacgccttg
gtcatgtctgccttcaacaacgacgccggctttgtggccgcgctcgataaggcgtgcggt
cgattcatcaacaacaacgccgtcacccggatggctcagtcgtccagcaaatctcccgag
ctgctggccagatactgtgattctttactgaagaagagctctaaaaacccagaggaagca
gaactggaggacacactcaaccaagtgatggttgtgttcaaatacatcgaggacaaagac
gtcttccagaagttctacgctaagatgttggccaaacgtctcgtccaccagaacagcgcc
agcgacgacgcagaggccagcatgatctccaaactcaagcaagcgtgcggcttcgagtac
acgtccaaactgcagcggatgttccaggacatcggagtcagtaaagatctgaacgaacag
ttcaagaaacacctgaccaactctgagcctctggacctggacttcagtatccaggttctc
agctccgggtcttggcctttccagcagtcctgcaccttcgctctgccttctgagctggag
cgaagctatcagcgcttcacagcgttttacgccagcagacacagcggcaggaagctgacc
tggctctaccacctgtccaaaggagagctggtcaccaactgcttcaagaacagatacacc
ctgcaggcctccaccttccagatggccatcctgctgcagtacaacacagaggacagctac
accgtccagcagctcaccgacagcacacagatcaaaactgacattctggttcaagttctg
cagattttgttaaaatcaaagcttctggtgatggaagacgagaacgccaacgtggacgag
gtggatttcaaacccgacaccgtcatcaaacttttcctcggttacaagaataagaaactg
agggtgaacatcaacgtcccgatgaagacggagcagaaacaggagcaggagacgactcac
aagaacatcgaggaggatcggaagctcctcatccaggccgccatcgtgaggatcatgaag
atgaggaaggtcctgaagcaccagcagcttctggctgaagtgctgaaccagctctcgtcc
cgattcaaaccccgagtccccgtcatcaagaaatgtatcgacatcctgatagagaaggag
tacctggagcgagtggacggggagaaggacacgtacagctacctggcctga

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