Anoplopoma fimbria (sablefish): 129110764
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Entry
129110764 CDS
T09102
Symbol
puf60b
Name
(RefSeq) poly(U)-binding-splicing factor PUF60-B isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129110764 (puf60b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129110764 (puf60b)
Spliceosome [BR:
afb03041
]
Complex A
U2 snRNP components
U2 related factors
129110764 (puf60b)
Complex B
129110764 (puf60b)
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GFIT
Motif
Pfam:
RRM_1
DUF1543
Motif
Other DBs
NCBI-GeneID:
129110764
NCBI-ProteinID:
XP_054478939
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Position
21:complement(6443168..6451183)
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AA seq
540 aa
AA seq
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MAVTETAGGEALTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAH
QQQQLTNLQMAAVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFA
PFGPIKSIDMSWDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQ
AQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCTLARDPTTGRHRGFG
FIEYEKPQSALDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAAT
AKITAQASMNPFQRDLMAFQEAVAGASVLGALAAPQLLSQQMGIPQAVMAAQAPGVITGV
TPVRPPIPVLPQVGLVNPVLASPPVLSNQAGGSNQQERKEEKEEMLQDGTGQEMLSDQEH
MSISGSSARHMVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGAVNRVIIY
QEKQGEEEDADIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgacggagactgcgggaggtgaagctctgacgatggagaatggacagggcaca
ggctccaagctgggtctgcctcctcttaccccagagcagcaggaggcccttcagagggcg
aagaagtatgccatggaacaaagcattaagagtgtgttggtgaagcaaaccatcgcccat
cagcaacaacagctcaccaacctgcagatggcagcagtgacaatgggctttggagatcct
ctctcacctttacaatcggtggcagctcagcggcaacgtgccctagccatcatgtgtcgg
gtgtatgtgggctccatatactatgagctcggtgaggacaccatcagacaggcctttgcc
ccctttggcccaatcaagagcattgacatgtcttgggactctgttacaatgaaacacaag
gggtttgcctttgtggaatatgatgtgccagaggctgcccagctggctctggagcagatg
aactcagtcatgctgggggggagaaacattaaggttgggcggccaagtaacatcggtcag
gcgcaacccatcattgaccagctggcagaggaggcgcgcgcctttaatcggatctacgtg
gcgtccgtccaccccgacctctcagacgatgacatcaagagtgtgtttgaggccttcgga
aggatcaagtcttgcacgttagccagagacccaaccacagggcgacacagaggctttggc
ttcattgagtacgaaaagcctcagtcagccctggacgctgtgtcttctatgaacctcttt
gacctggggggtcagtacctacgcgtgggcaaagcagtgacaccgcccatgcccctactg
acccccacgacccccggtggtctgccgcctgctgcagctgtggccgcagcggcagccact
gctaagataacggcccaggcaagtatgaatcccttccaaagggatttaatggccttccag
gaggctgtagccggagcttcagtcctgggggcgttagccgcaccccagcttctcagtcag
caaatgggaatacctcaggctgttatggcggcccaggcacctggggtaatcacaggtgtg
actccagtgcgtcctcccataccagtgctcccccaggttggacttgtgaaccctgtgctc
gcatcgccgccagtcctgtcgaatcaagccggtggttccaaccaacaagagaggaaagag
gagaaggaggagatgctgcaggacggtacggggcaggagatgttgagcgaccaagaacac
atgagcatctcgggcagcagtgccagacatatggtgatgcagaagctgctaagaaaatca
gagtccacagtgatggtgcttcgaaatatggttggacccgaggacatcgacgacgacctg
gagggtgaggtgacagaagagtgcgggaagtttggcgccgtcaacagagtcatcatatac
caagaaaagcaaggagaagaagaggatgcagatatcattgtcaaaatttttgtagagttt
tccatggcctcagagatgaacaaagccatccaggccctcaatgaccgctggtttggaggt
cgcaaagttgtcgcagaggtctacgaccaagaccgtttcaacagcagtgacctctctgca
taa
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