Anoplopoma fimbria (sablefish): 129110797
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Entry
129110797 CDS
T09102
Symbol
gli3
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional activator GLI3
KO
K06230
zinc finger protein GLI3
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129110797 (gli3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129110797 (gli3)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
129110797 (gli3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
129110797
NCBI-ProteinID:
XP_054478986
LinkDB
All DBs
Position
21:complement(6129856..6220816)
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AA seq
1628 aa
AA seq
DB search
METQSQASSAAEKKKRVETIVATKGSSARNDISEKAVASSTTSNEDESSGTPYHRERRNA
ISSQAPRGPDRSVSEEPSTSTEERPSLLKKELHGSLPHLAEHALPYRGTLFAMDXRNGYL
DPHYPTPQFFPTFHPPVPIDDRHTQGRYIYEPSPVPPLHVPHGLAGSPAFSDISLIRISP
QRNPSLGAESPFHPPHPYINPYMDYIRSLHSSPSISVLSATRGLSPADAPHTGLTTAEYY
HQMALLAGHRSPYTTDLLPSVASTAGASTATALHMEYLQAVENSRFSSPRLPSRPSRKRP
LPISPLSDPGFDLQTVIRNSPSSLVTMLNNSRSSSSTSGSYGHLSAGAISPALSFAYPPT
PVALHMHQQLMGRQPGLVGSAGHSPPLIHPSPAFATQRPVPGIPLRAQRQRAPALSNDSS
QTKPTSESAVSSTGDPMHHKRSKLKPEEEMPSPGAVSVQDHPDGMTLVKEEGDKDESKQE
PEVVYETNCHWENCCREFDTQEQLVHHINNDHIHGEKKEFVCRWEECSREQKPFKAQYML
VVHMRRHTGEKPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDR
AKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDYPRPPPNR
EHGGNGQGRSPGQLPLGGYTDQREYNHATSKQDECLQVKSIKTEKPMTSQPSPGGQSTCS
SDQSPVSTYPCSGVQLAVSAGRSPGEGLEEDEEKEEHDEEVEEECVGQRAPIMDSTVSTV
TAAMLTLQARRSVGRPVRWMEHIKMERLKQVNGAPPRLGTLSPTPPPKGSTLPTILGKGS
CLGRQWGVSAPQPPVHAELGSTELTVLNLLRDRRDSSGSATSSAYLSSSRRSSGISPCFS
SRRSSQASQSEGTMAAAHHRRLHNLSSSDSYDPISTDASRRSSEASHYGGGTGGGILSGG
GCGSAGVGMGVGHGGSRGMLTLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSLKTRMAM
MDEGGSNHSLPPLVRPHCCGDGTNGYTNGYTGHAGYRRRVLYPGEGPLNGNRRASDPVRT
QPRDIGGLPPVQRFNSLNNLHPLPPLSHHSTPETRSFSLQNYTRSEGNLQRGLQHSPYTP
SIAEHAALEALAMEDEAGLLLGDEDMLPDDLVQYLHSQDQVDGGSSMYIEDQIASIQRDT
SQPSMEEVEQIQTSGLNMGFAGSHSIQPQQTAERTSPSKLPIQWNEVSSGSADRSPQKEN
NHQTQCGRWSGAEHGPVSAPFGRFGNMVVQQQAPLDFQNSCAQANQSQSACCVNPAVKLE
TSPNSCMEMRGTGNNSTNTFGRPNFAQIIDGPLQQGFKQQASNGPPKQSHFQQNHNGSTS
CQIGNNLVLSRASMDILPGLSQGTGLHHNRQVHVPRPPDGYRNMVRTQQYLNPENSGEIQ
VSLNQQQQLQRSGDHCSLAHQVSGLKLEAPDQGYLEEGFGDCLAYEPLDRKASSFPVLED
QCLLNSMAESVGQVVGSGGGNSAALLSPGTDQVTSTMDGNVPGILDEGVSLDFGAMLEDG
YDQGSLVSGVLSPSIFQGLSRTSSRLTTPRASATFHSVAPGLNNMAIGDMSSLLTTLAEE
SKFLATIQ
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggaaacccagtcccaggccagttcagcagctgagaagaagaagagggtggagaccatt
gtggcgaccaagggctcatcggcgcgcaatgacatcagcgagaaggcggtggcctccagc
accacctcaaacgaggacgagagttcaggcacgccgtaccaccgcgagaggcgcaatgcc
atcagctcccaggcgccccgcggccccgacaggagcgtgagcgaggagccctccacctcc
acagaagaacgcccctccctgctcaagaaggagctgcacgggtccttaccccacctggct
gaacatgccctgccgtaccggggcactctgttcgccatggacncccgcaacggctaccta
gacccacactatcctactccacagttcttccccaccttccatcctcccgtgccaatcgac
gacagacatacccagggacgttacatctacgagccctcccctgtgccccctcttcatgtg
cctcacgggttggctggcagtccagctttctccgacatctccctcatccggatctcgccc
cagaggaacccctctttgggggcggagtcgccctttcaccctccgcacccttacatcaac
ccgtacatggactacatccgctcgctccacagcagcccctccatctccgttctgtcggcc
acccggggcctcagccctgcagatgcccctcacacaggtctgaccacagccgagtactac
caccagatggctctgctggcgggccaccgtagtccctacacgaccgacctgctcccgtcg
gtggcgtccacagccggcgccagcaccgccaccgccctgcacatggaatacctgcaggcc
gtggagaattcccgtttctcgagcccgaggctgccatcaaggcccagcaggaagcgcccg
ctgcccatctcgccgctctccgatccaggctttgacctgcagacggtgatccgaaactca
cccagctccctggtcaccatgctcaacaactctcgctccagctcctccaccagcggctcc
tacggtcacctctctgctggagccatcagcccggcgttgagcttcgcctaccctccaacc
ccggtggcgttgcacatgcaccagcagctgatgggccgtcaaccgggcctcgtgggctcc
gccggccacagcccgcccctcatccacccgtcgccggccttcgccacccagaggcccgta
cccggcatccccctccgggctcagcgccagcgagcgccggccctctccaacgactcctcg
cagaccaaaccaacaagtgaatctgcagtgagcagcacgggagacccgatgcaccacaaa
cgctccaaactgaaaccagaggaagagatgccgagtccaggcgcagtgagcgttcaggac
catccggatgggatgaccctggtgaaagaggaaggggacaaggatgagagcaaacaggag
cccgaggtggtttacgagacgaactgccactgggagaactgttgccgcgagtttgacacg
caggagcagctagtacatcacatcaacaatgaccacatccacggggagaagaaggagttt
gtgtgtcggtgggaggaatgttctcgagagcagaagcccttcaaggcgcaatacatgctg
gtggtccacatgcgcaggcataccggggaaaaaccccacaagtgcacgtttgagggctgt
gccaaggcctactcccgtctggaaaacctcaagacccacttacgctcgcacaccggagag
aaaccttatgtgtgtgaacacgaaggctgcaacaaggccttttccaatgcctcggaccgg
gccaaacatcagaaccgcacacactccaatgagaaaccgtatgtgtgtaaaatcccaggc
tgcaccaaacgctacacggaccccagctccttacgcaagcacgtgaagacggtgcacggg
ccggaggcgcacgtcaccaagaaacagcgcggagattacccgcgtcctccacccaaccgg
gagcacgggggcaacggccagggccggtcgccagggcaactgcctctgggtgggtacacg
gaccaaagggagtacaaccatgctacctcaaaacaggatgaatgtctgcaggtcaagtcc
atcaagacagagaagcctatgacgtctcagccaagccctggcggtcagtctacatgcagc
agtgaccagtcccccgtcagcacctatccctgcagtggagtccagcttgctgtgagcgcc
ggacgctcgccaggggaggggctggaggaggacgaggagaaagaggaacacgatgaggag
gtggaggaggagtgcgtgggccagcgggcccccatcatggactccacagtctccacggtg
accgcggccatgctgaccctgcaggcgaggcgaagtgttggccgccctgtgcgctggatg
gagcacatcaagatggagaggctgaagcaggtgaacggagcgccgcccaggctggggacc
ctgtcccctacaccgcccccgaaaggttccacactacccactatactggggaagggatcc
tgtctgggcaggcagtggggggtgtctgctcctcagccacctgttcacgctgagctgggc
agcacagagctaacggtgctcaatctgctccgagaccggcgtgacagcagcggtagcgcc
accagctcggcctacctgagcagcagtcggcgctcctcgggcatctctccctgcttctcc
agtcggcgctccagccaggcttcccagagtgagggcacgatggcagccgcccaccaccgc
cgcctccacaacctgagctccagcgactcttacgaccccatctccacggatgcctcgcgc
cggtccagcgaggcaagccattatggaggagggacaggaggagggatactctcaggtggt
ggctgtggaagtgcaggagtaggtatgggagtgggtcacggggggtcacgggggatgctc
actttaaccccagcacagcactaccacctgaaagccaagtacgcggcagcaacaggcggc
ccacctcccacgcctcttcccaacatggagcgcatgagcttgaagactcgcatggccatg
atggatgagggtggtagcaaccactccttgccgcctctagtcaggccacattgctgcggt
gatggcaccaacgggtacaccaacgggtacacgggacatgcaggttacaggaggagggtc
ctctatcccggcgagggaccactgaacgggaaccggagggccagtgatccggtgcggacg
cagcctcgtgacattggcggtctgcccccagtacaacgcttcaacagccttaacaacctc
caccctcttccacctctatctcatcattctacacctgaaactcgcagctttagcctacag
aactacacacgctcggagggcaacctgcagagaggcctgcagcactcaccgtacactcct
agcatcgcagaacacgcagccttagaagccctggccatggaggacgaggctggcctgttg
ctcggggatgaggatatgctcccagatgacctggtgcagtatctccactcccaagatcag
gtggacggtggctcctccatgtacattgaggaccaaatagcttctatccaaagggacacc
tcccaaccatctatggaggaggtagaacagatccagacttcagggttgaacatgggcttc
gctgggtcccacagcatccagcctcagcagacggcagagcggacgagccccagtaagctt
cccatccagtggaatgaagtgagctccgggagtgctgacaggtcccctcagaaggaaaac
aaccaccagacacagtgtggaaggtggtcgggtgctgaacacggacctgtatccgcgcct
tttggcaggtttggaaacatggtggttcagcagcaagcgccccttgatttccagaacagt
tgcgcccaggctaatcagtcccaaagtgcttgttgcgttaaccccgcggtgaagctagag
acatcgcccaactcctgcatggagatgagaggtaccggaaacaactctacaaacaccttt
ggaaggcctaacttcgcacagatcatcgacgggcctcttcagcagggcttcaaacagcag
gcctccaatggacctccaaaacagagccacttccaacagaaccacaacggtagcacctct
tgccagatcgggaacaacctagtccttagcagggcctctatggacatcctccccggcctc
tcccagggaactggtcttcatcacaatcggcaggttcatgtccctcgcccacccgacggt
tacaggaacatggtcaggacccagcagtacctcaatccagaaaactctggtgagatccag
gttagtctcaaccagcagcaacaactgcagagaagtggggaccattgctcccttgcacat
caggtatccgggctcaaactggaggccccggatcaggggtacttggaggagggcttcggt
gactgcctcgcttacgaaccattggatcgcaaggcctcctcgttccctgtcctggaggac
cagtgcttgctgaactccatggcagagtctgtgggccaagttgttggcagtggcggcggg
aactctgccgcccttctctcccctggtacagaccaggtgaccagcacaatggatggcaat
gtgcctggtatattagacgagggggtgagtctggactttggtgccatgctggaggacggc
tacgaccagggtagcctggtctcaggtgtgctgagtccctccatcttccagggcctgtcc
aggacctcatcacgcctgaccacccctcgagcgtccgcgaccttccacagcgtggccccc
ggcctcaacaacatggcgatcggagacatgagctctcttctcaccacactggctgaggag
agcaagttcctggctaccattcagtag
DBGET
integrated database retrieval system
