Anoplopoma fimbria (sablefish): 129110798
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Entry
129110798 CDS
T09102
Symbol
tgif1
Name
(RefSeq) homeobox protein TGIF1 isoform X1
KO
K19383
homeobox protein TGIF1
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129110798 (tgif1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129110798 (tgif1)
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
129110798 (tgif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
129110798
NCBI-ProteinID:
XP_054478987
LinkDB
All DBs
Position
21:complement(8295323..8300553)
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AA seq
315 aa
AA seq
DB search
MRKRALSRRDADISGLMMLSGSETDDEDSVDAPLDLSSSSGSNGKRKRRGNLPKESVQIL
RDWLYEHRYNAYPSEQEKALLSKETQLSTLQVCNWFINARRRLLPEMLRKDGKDPNQFTI
SRKGSKAGDSFSDSSQSPKHGSPAGGTEDSYDKRALHPSSFEPGVPRKAASPSMPSPTSL
SPSPGLVPSRPSVICHTTVTTAMQGSPTASQPSVPGMNCDRAAELLHAVQVQALLRCQDE
GQGSKPLPTTTTTATTTILSSNGMEGNLSPRSGLFNTPPPTPPDLTQDFSGFQLLVDVAL
KRAAEMELQAKQLVS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagggctttgagccgaagggacgcagatatctcaggtttgatgatgctgtca
gggagcgagacagatgacgaggacagcgtggacgcccctctggatctgtcgtccagctcg
gggagcaacgggaagaggaaacggcggggaaatctgcccaaggagtcggttcagatcctg
agggactggctgtatgagcaccgttacaacgcctacccgtctgagcaggagaaagccctc
ctgtcaaaggagactcagctctcaacactacaggtgtgcaactggttcattaacgcacgg
cggcgacttcttccagagatgctgagaaaagatggcaaagatccgaaccagttcaccata
tccagaaaaggtagcaaagcgggcgacagcttctccgacagctcccagtccccgaaacac
ggcagtcctgcaggcggcacggaggacagctacgacaaacgcgctctccacccctccagc
ttcgaacccggtgtcccgaggaaggcggcgtccccctccatgccctctcccacctccttg
tccccttctccagggctcgtgcccagccggccctctgtcatctgtcacaccactgtcacc
acagcgatgcagggaagcccgacggcctcccagccctctgtgccgggaatgaactgtgac
agggcagctgagctgttacatgccgtgcaggtccaggcgctgctcaggtgccaggatgaa
gggcaggggagcaaacccctccctaccaccaccaccaccgccaccaccaccatcctcagc
agcaacggcatggagggcaacctgagcccccgcagcgggcttttcaacacccctccaccc
acccctccagacctcacgcaagacttcagcggcttccagctcctggtggacgtggccctc
aaacgggccgcagagatggagctgcaagccaaacagctggtctcctaa
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