Anoplopoma fimbria (sablefish): 129110809
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Entry
129110809 CDS
T09102
Symbol
nphp3
Name
(RefSeq) nephrocystin-3 isoform X1
KO
K19360
nephrocystin-3
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129110809 (nphp3)
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
129110809 (nphp3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
NPHP3_N
TPR_14
AAA_16
TPR_11
NACHT
TPR_19
TPR_6
AAA_22
ATPase_2
KAP_NTPase
DUF2225
AAA_14
AAA
AAA_19
Macoilin
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
129110809
NCBI-ProteinID:
XP_054479002
LinkDB
All DBs
Position
21:8414664..8424516
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AA seq
1303 aa
AA seq
DB search
MGTASSLVSPGEVIEDGYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
DLEYAAEYERLRKEYEIFRVSKNNEISSMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLEAKLQQLQAQ
GIQVYDLNDSDSDDNQTTVTAAGTQCEYWSGGVLGSEPSMGSMMQLQQTFRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVPQALWSNTVRCYLIFTQETKAELDVFIKKHSP
ALRRMCEGLGHFYLNVCFPEENAASYDVERKQEIERSSVCVLLVKSTVTSSVVEDCDEAF
VKNPDGHPLVLYLRTEEDHNLTGPTRQLLERVNAADKAAKLKVVDHSGSAEEGADLIYIQ
LEKVIKQELLGLEGADVDSMDFGIEEGREEDSGDVLWDLHDEQEQIESYQQACSSSTTSQ
LGFQKYIDRLNDMIAAPPPTPPLLVSGGPGSGKSLLLSKWIEQQQKQSPNTLFLYHFVGR
PLSTSTEPVLIIKRLTVKLLQHFWSISGLSMEPSKILEEFPRWLERLSARHQGNIIIIID
SIDQIQQAEKHMKWLIDPLPVNVRVVVSVNVETCPQAWRLWPTLHLDPLSPREVRSIVNA
ECQSMDLKLTKDQEKKLERHCRSASTCNALYVTILARMIISSISGCSLEKSLEQCLQCQD
TMSLYRLALKMTLNSLNPDREQHIMREILCLVCASHNGVSESEVLDLFPELELPVLSSLL
YRLNRLCIVTLCCGLIRFQHLQAWEAVRLEFLGGGSSSSAYRDKLIQYFSQQLGQDRVTW
RVADELPWLLQQQEDRTKLQLSLLNLFVSQNLYKRGHFSELLAYWQYVGKDKSSMATEYF
DSLKHYEKSCESEDSMTKLANLYETLGRFLKDLGLPSQAVAPLQRSLEIRETALDPDHPS
VARSLHQLAGVYVQWKKYGNAEQLYKQALEISENAYGAEHASVARELESLAMLYQKQNKY
EQAEKLRKRSVKIRQKTARQKGHMYGFTLLRRRALQLEELTLGKDSADSAKTLNELGVLY
YLQNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLAALHTERREYEMSEDMYERALD
IRKRALSPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELSLEIREKSFGPKHPSVATALV
NLAVLYCQLKNHSDALPLYERALKVYEDSLGRSHPRVGETLKNLAVLSYEEGDFEKAAEL
YKRAMEIKEAEPSLVCGNAPSRHSSSGDTFSLRGPAALPHAPR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgcctcctctctggtcagcccaggagaggtcattgaggatggatatggtggt
gaaggaggggaagcctgtgagatcccagtggaggtcaagcccaaagccagactcctgcgc
agctcctttcgcagaggacctcgggtgattggggccagtttcaaatccacaggttcagtg
gatctggagtatgctgccgagtatgaaagactccggaaagagtatgagatattccgcgtc
agcaagaataacgagatctcatccatgcaaaagaaggaggcgaagctggatgaggagaac
aagaggctgagagctgagctacaggctctgcagaagacctaccagaagatccttagggaa
aaagagagcgctcttgaggcaaaatatcaagctatggagagggctgccacctttgaacat
gacagggacaaagtaaaacgacagttcaagattttccgggagacaaaagaaaaggaaatt
caggatcttctgcgcgccaagagggacttggaggccaaactgcaacagttgcaggctcag
ggcatccaggtctatgacctcaatgattctgactcagatgacaatcaaaccacggttact
gctgcagggacacagtgcgagtactggtctggtggtgtgctgggaagtgagccctcaatg
ggaagcatgatgcaattgcaacagacctttcgaggaccggaatttgcccacagtttgata
gatgtggaaggaccctttgcaaatgtgagcagagatgactgggatgctgcagtggccagt
ctgcttcaggtctcacctcatgttccccaggccttgtggagtaacacagtgcgctgctac
ctaatctttacccaggagaccaaagctgagcttgatgtcttcataaagaaacactcacct
gcgttacggagaatgtgcgaaggtctaggccatttctacctgaatgtctgcttcccagag
gagaatgctgcctcgtacgatgtggagcgaaagcaggagattgaaaggagctccgtgtgt
gtgcttcttgtcaaatctactgtcactagctctgtggtggaggattgtgatgaggctttt
gtgaagaatccagatggccatccactggtgctctacctcaggactgaagaagatcacaat
ttgactggacccaccaggcaactgctagaaagggtcaatgctgcagacaaggctgctaaa
ctcaaggtggtggatcatagtggttctgcagaggagggggctgacctcatttatattcaa
ctggagaaagtcatcaaacaggagttgctgggtcttgaaggagcagatgttgattctatg
gactttggaatagaagagggacgtgaagaagactcgggagatgtgctgtgggacctgcac
gatgagcaggaacagattgagtcctaccagcaggcctgtagcagcagcaccacgtcccag
ttaggcttccagaagtatatagatcgtttgaatgacatgatagctgctccacctcccacc
cctcctctgctggtgtctggtggtccaggctcaggaaagtctctcctgctctccaaatgg
atcgagcagcagcagaagcagtcccccaacaccttgttcctttatcattttgttggccgc
ccactttcaacaagcacagagccggttctcattatcaaacgcctcacagtcaaactgctg
cagcacttctggtccatttctggcttgtcgatggagcccagtaagatcttagaggagttt
ccccgctggcttgaaagactatcagcacgccatcaaggaaacattataatcatcatcgac
tccattgaccaaatacagcaagcagaaaaacacatgaagtggctaattgaccctctccct
gtcaacgtccgagtggtggtgtctgtcaacgtcgagacttgtcctcaagcttggaggtta
tggcccacactccacttagacccactgagtcccagggaggtcaggagcattgtcaatgca
gaatgccagagcatggatctcaaattgaccaaggatcaggagaagaagctggaaagacat
tgtcgctctgcatcaacctgcaatgcattgtatgtcacaatacttgcaagaatgataatc
agcagtatatcaggttgttcgctggagaagagcctggagcagtgtttacagtgtcaggac
accatgtcactctaccgtctggcactcaagatgactctgaactccctcaacccagacaga
gagcaacacattatgagagagatactgtgccttgtatgtgccagccataatggagtgagt
gaatcagaggtgctagaccttttcccagaactggagttgcctgtcctgtcctctctgctt
taccgtctgaacagactctgcattgttaccctctgctgtgggctcatcaggtttcaacac
ctgcaggcttgggaagctgtaaggttggagttcctgggtggaggaagtagctcgtctgcc
tacagagataaactcatacagtatttcagtcagcaactcggccaggaccgtgtgacgtgg
cgtgtcgcagatgagctgccctggctgctccaacaacaggaggataggactaaattacag
ctcagcctcctgaacctgttcgtttcccaaaacctctacaagaggggtcatttctctgag
ctgctagcctattggcaatatgtgggcaaagacaaaagctccatggccactgagtacttt
gactccctgaaacactatgagaagagctgtgagagcgaagacagcatgaccaagttggca
aacctgtacgagaccttgggacgtttcctcaaagacctgggcctccctagtcaggcagta
gcacctttacaaaggtcacttgagattagagagacagccctggacccggaccatcccagc
gtagctcgctccctgcaccagctggctggggtttatgttcagtggaagaagtatggcaac
gctgagcagctgtacaagcaggccctggagatcagtgagaatgcctacggagcagagcat
gccagcgtagcacgagagctggagtcacttgccatgctctatcagaaacaaaacaagtat
gaacaagcagagaaactccggaagaggtcagtgaagatccgtcagaagactgctcgccag
aaaggtcacatgtacggcttcactctgttgagacgcagagccttacagctggaagagctg
accctgggaaaagactctgcagactcagccaagacacttaatgaactaggtgtcctgtac
tacctccaaaacaacctggatgcagccaagatgttcttgacccgctccctggagatgcgt
cagcgtgtcctcggtccagatcacccagactgtgctcagtccctcaacaacctggccgca
cttcacacagagaggagggagtatgagatgtctgaggacatgtatgagagggcgctagac
atccgcaagagggccttgtccccagaccatccctcgctggcttacacactcaaacacctg
gccatgctctataaacgcagagggaagctggaaaaggcggtgccgctgtatgagctgtct
ctggaaatcagggaaaaaagttttggacccaaacaccccagtgtggccacagcgctggtc
aacctggctgtactctactgccaactaaagaatcacagtgacgccttgcctctttatgaa
cgagcactgaaagtgtatgaggatagtttgggtcgctcacaccctcgggtcggagagacc
ctaaagaacttggctgtgttgagctatgaagagggtgacttcgagaaggcggcagagctt
tacaaacgtgcaatggagattaaggaggcagagccatcgttggtgtgtgggaacgccccg
tcccgtcactcctccagtggggacacgttcagcctgaggggaccggctgccctcccacat
gccccgaggtga
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