Anoplopoma fimbria (sablefish): 129110819
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Entry
129110819 CDS
T09102
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
afb04131
]
129110819 (vps53)
Membrane trafficking [BR:
afb04131
]
Protein recycling
Others
EARP complex
129110819 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
129110819 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
Laminin_II
Syndetin_C
hAT-like_RNase-H
FBF1
VPS51_Exo84_N
NBD94
Sec8_N
COG5_N
Motif
Other DBs
NCBI-GeneID:
129110819
NCBI-ProteinID:
XP_054479061
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All DBs
Position
1:17181669..17207420
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AA seq
830 aa
AA seq
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MIEEEEFEFAEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEESFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRIELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDTPGQKKTESPLNSTNPFLEDEGGEDMGVDKDEDLAKPRKPKAPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKAGTEEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSNSNSVGLTISSLLKEKEGSEA
AKFTMDELCLICSILSTAEYCLATTQQLEEKLKEKVDKLLVERINLTGEMDTFSTVISNS
IQLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPNIRDNLASTRK
YFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADGNPETFQKILDMKGLKRS
EQSSMLELFRQRLPTPPSGADGGSSLFSAPTPEQESSRIRKLEKLIKKRL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggaagaagaatttgaatttgctgaggatttggaggctattttgcatcttacc
ccagaggtgcaactagccattgaacaggttttccccagccaggaccccctggacagagca
gacttcaatgctgtagaatacatcaacacactgttccccaccgagcagtctttggctaat
attgatgacgtggttaacaagattcggctaaagatccggcgcctggatgacaacatcaga
acagttgtgagaggccagaccaatgtgggccaggatggcagacaggctctggaagaggcc
cagatagccatccagcagctctttggcaaaatcaaagacatcaaggacaaggcagagaag
tctgaacaaatggtcaaggagattacaagggacattaagcagctggaccatgccaagcgc
cacctaaccacatccatcaccaccctcaaccacttgcatatgttggcagggggtgttgac
tctttagaagccatgaccaggaaacggcagtatggtgaggtggccaacctgctgcaggga
gtggtcaatgtgcttgaacatttccacaagtacatgggcataccccagattagacagctt
tctgagagagtaaaggcagctcagagtgagttggggactcagatcctggcagattttgaa
gaatctttcccctctcaaggctccaagagaccaggcggtcccagtaacgtgctaagagat
gcctgtctggtggccaatgtgctggatccgcgcattaaacaggaaattatcaaaaaattc
atcaggcaacacctctcagagtacctggtgttattccaggaaaaccaagatgttgcatgg
ctagacaagatcgatcgccgctatgcctggatcaaacggcagctggtggactacgaggag
aagtatggacgcatgtttcctgaggagtggtgcatgacggagcgtattgctgtggagttc
tgccacatcaccaggattgagctagccaaagtgatgcgaacacgggctaaggagattgag
gtgaagctgcttctgtttgctattcagaggactacaaacttcgagggtcttctggccaaa
cgtttcacaggatgcaccttgacggacacacccggacagaagaagacagagagccctctc
aactccactaaccccttcctggaggatgagggaggtgaggatatgggcgtggataaagac
gaggacctggctaagccaaggaagccaaaagctccggacaaccctttccatggcattgtc
tccaagtgctttgaacctcatctctacgtctacatagaatcacaagacaagaacctgggc
gaactgattgaccggtttgtggctgacttcaaagcacaaggtccaccgaaggcaggcacc
gaggagggcggagcagtgctgcccagctgtgctgacctgtttgtctattacaagaagtgc
atggtgcagtgctcccaactgagcaccggagaaccaatgatcgccctcacaaccatcttc
cagaaatttctcagagagtacgcttggaagatcctctctggcaacctgcctaaatccaac
agtaacagcgttggtcttaccatcagcagtctgctgaaggagaaagaaggctccgaagct
gcaaagttcaccatggacgagctctgcctgatctgtagcatcctgagcactgcggagtac
tgcctggctaccacacaacagttggaagagaaactgaaggaaaaggtagacaaactccta
gtggagagaattaatttgacaggggaaatggatacattcagcactgtgatctcaaacagt
atccagctactcgttcaagatcttgatgctgcctgtgatcctgctcttactgctatgagc
aagatgccctggcagagtgtagagcatgtgggtgaccagagtccctatgtgacgtcaatc
atcatgcacattaagcaaaatgtgccgaacatcagagacaatctggcatccacacgcaaa
tacttcacacaattctgcatcaagttcacaaattctttcattcccaaatttatcaaccac
ctgttcagatgtaagcctatcagcatggtgggcgctgaacaactcctccttgacactcac
tccttgaagacagtcctgctggatctaccctccataggctcccaggtgctccgcaaggca
cctgccagctacaccaaaatagtggtgaaaggcatgacccgggcagagatgatccttaag
gtggtgatggccccacatgaaccgccagtggtgtttgttgataactacatcaaactcctg
gctgatggaaatcctgagaccttccagaagattctagacatgaagggtctgaagcgcagc
gaacagagcagcatgctggagctcttcaggcagaggctaccaactccaccttccggggcc
gatggcggctcctctctcttcagtgcccccacccctgaacaggagtcctctcgcatccgc
aaactagagaaactcatcaagaagagactgtga
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