Anoplopoma fimbria (sablefish): 129110828
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Entry
129110828 CDS
T09102
Symbol
cdk13
Name
(RefSeq) LOW QUALITY PROTEIN: cyclin-dependent kinase 13
KO
K08819
cyclin-dependent kinase 12/13 [EC:
2.7.11.22
2.7.11.23
]
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
afb01001
]
129110828 (cdk13)
Enzymes [BR:
afb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
129110828 (cdk13)
2.7.11.23 [RNA-polymerase]-subunit kinase
129110828 (cdk13)
Protein kinases [BR:
afb01001
]
Serine/threonine kinases: CMGC group
CDK family
129110828 (cdk13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Haspin_kinase
ABC1
Kinase-like
Pkinase_fungal
Kdo
Motif
Other DBs
NCBI-GeneID:
129110828
NCBI-ProteinID:
XP_054479030
LinkDB
All DBs
Position
21:complement(5594741..5603620)
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AA seq
1410 aa
AA seq
DB search
MPNSEVLREARGRSPSNQRNANRQDRRSKPGSGAAQRDRHREKRRPSASRRKKRRQTKGK
DLLSAGATGDPHVDRKGTLVKDTELRTLVEYDDVSSQSERFSGSPSPKLDPHADRLSVDR
LSDTDCNGPASPHRRHPRDKAAVCVKEGQTRGPSERSKPEKEQSRKKDRQSRERDSSKVR
SGGSLGGSKNLRDTTRSSDRNGKKTSSSQASQSADKKDSKRQKSKTRSDKETPSAYRDAP
QSYREDREDLRAYKRSPGFKSESPYGTSYSYSYQSPGGYNQQISRRSPTYGSKRLSPSSA
YYSRDVDGYGAYGMPKSPSSYSSNKRKRSPASPANWRRSPSYGRHSPFEQGEFGASPYGN
RRRSRSPYRKSLSPSPDVRRSARSRSRSPYSSTRHSRSRSRHRHSRSRSHPSSLSPSTLT
FKTSLAAELSKQKKVKAAEAAAKAKNSSNTSTPTKGSSSAPQPSPKSNHTSRKGRPPSPP
QPEKGPRTPTSIQPQSPADKSAKRTAEHQTSRDRDGKGKDDSVHRDKRKAPAAGQSKDKE
RATVPLISTLPSLPLPLAVLEHMNKGESLKDSLLSGKKKSERKARQLLSDLPLPPELPGG
TSSPRSPPDDKKYQTLRRRPKICGPRYGEIKETEIDWGKRCVDKFEIIGITGEGTYGQVY
KAKDKDTAEMVALKKVRLDNEKEGFPITAIREIKILRQLNHKSIINMKEIVTDKEDALDF
KNDKGAFYLVFEYMDHDLMGLLESGLVHFNESHIKSFMRQLLEGLDYCHKKNFLHRDIKC
SNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYTPAIDVWSC
GCILGELFTKKPIFQANQELAQLELISRICGSPCPAVWPDVIKLPFFNTMKPKKQYRRRL
REEFAFIPPSALDLFDHMLNLDPSKRCTAEQALGSEFLKDVDPDKMPPPDLPLWQDCHEL
WSKKRRRQKQMPEEAAAPKAPRKELGLDDSRSNTPQGFPAPGGVKAPNTAASALLDTKGP
NSQLTQEQLAVLLNFLGQTKGSANTAQFVQSMGTKVNQETLQQLSKALAPTDPAEPPPQP
APAKXLPALCPPAGVPRTPPMPKPPSPPMSAPPGIPEGEAAAATQTAMTMLIAQLLQAQQ
APRQEPSDGGEGAESVNPAGAAAPGGQPLPPEVKQPPEPSPVSPVSEVGGVSILPPDQRP
PEPPEPPPHADLDYRQPPPEPKTGHAPPIASAGGGDGGRPPEPDYPPLPTAEGPGYGGDY
PSPPPPFTPAGFVDGYMGHMLGGGLPPHALREVFSGPGPAASSSSAAAHPDPFPPGSGAT
GPSSMVFTGDQDHRFKYNHSPLPVEGPPNPSAIHLYNHALARKDGGPPPPIPAPGQPWGS
PSQVGAPPLPLGFVPHVNSTATIRGRGLPF
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgcctaattcagaggtgcttagagaggctcggggaaggagcccctccaatcagaggaat
gctaacaggcaggacaggaggagtaaaccggggagcggtgctgctcagcgggacaggcac
cgggagaagaggcggccgtctgcttcacggaggaagaaacgcagacagactaaggggaaa
gacttgttgagtgctggtgcaacaggagaccctcatgtggaccgaaagggcactttggtt
aaagacacagagctgaggacactagtagagtatgatgatgtgagctcccagtcagagaga
ttctctggcagcccctctcctaaacttgacccccatgctgacaggctctcagtggacaga
ctcagtgatactgactgtaatggaccagcttccccacacaggagacacccgagggacaag
gcggcagtgtgtgtcaaagagggacaaacacgaggaccatccgagaggagcaagccagag
aaggagcaaagcaggaaaaaggaccgccagagccgggagagagactcctccaaagttagg
agtggaggtagcctcggtggctctaaaaacctcagagacactacaaggagcagtgacaga
aatggcaaaaagacgtcttcatctcaggcctcccaatctgcagataaaaaggattcaaag
aggcagaaaagtaaaacaagatctgacaaagagaccccatctgcatacagagatgctcca
cagtcttacagagaagaccgggaagacctcagggcatacaagagaagtcctggtttcaaa
tcagaaagtccctatgggacgtcttattcatatagctaccagtctcctggtggttataac
cagcaaatatctagaaggagtccaacttacgggagcaaaagactctctcccagttctgca
tattacagccgggacgtagatgggtacggggcatatggtatgccaaagtcacccagttca
tactccagcaacaaaagaaagagatctccagcgagcccagcaaactggcgcaggtcccca
agttatggccgacacagtccgttcgaacaaggagagttcggtgcaagtccgtatgggaac
cggaggagatcacgaagtccgtacagaaagtccctgagcccaagtccagatgtcaggcgt
tctgctagatcacgtagcagaagtccatattcatccacgaggcattctcgctctcgtagc
cgtcaccgccactctcgctcccgcagtcacccgtctagcctctccccgagcacgctcacc
ttcaaaaccagtctcgctgctgaactcagtaagcagaaaaaggtcaaagcggcagaagca
gcggccaaggccaagaactccagcaacacatctactccaaccaagggttcctcatctgct
cctcaacccagccccaagtccaatcacacgtccagaaagggtcgccctccgtctccaccg
caaccagagaaaggtcccagaactcccacatcgatccagccccagtcccccgctgacaag
tcggccaagaggaccgccgagcaccagaccagcagggacagagatggaaaggggaaagat
gactcggtacatcgggacaaaaggaaagcaccagcagccggacagagcaaagacaaggaa
agagccaccgttccgctcatctccactctaccatcccttccattgcccctagcggttctt
gagcacatgaacaaaggagaaagcttgaaggacagcttgctctcagggaagaaaaagtca
gagagaaaggcccgtcagcttctctccgacttgccccttccccctgaacttcctggtgga
acgtcttccccacgcagcccacccgacgacaaaaaataccaaactcttcgccggagacct
aaaatctgtggcccaagatacggcgagattaaggaaactgagatagattggggcaaacgc
tgtgtggataaatttgagataattggaatcacaggggaaggcacctacggccaggtgtac
aaagctaaagacaaagacactgctgaaatggtggctttgaagaaagttcgtctggacaac
gaaaaggagggcttcccaatcacagccatcagagagatcaagattttgcgacaactcaac
cacaagagcatcataaacatgaaggagatcgtcacagacaaagaggatgctctagatttc
aagaatgataaaggtgctttctatcttgtattcgaatacatggaccacgacctaatgggt
ttgctggagtcgggcctggtccatttcaacgagagccacatcaagtcgttcatgcgacag
ttgctggagggccttgattactgccacaagaagaactttctgcacagagacatcaagtgc
tccaatattctgctcaataacaaaggtcaaataaagcttgcagactttggtcttgctcgg
ctgtataactctgaagagagtcgtccatacaccaacaaagtcattacactatggtaccgt
cccccagagctacttctgggagaagagaggtacacgccggctattgatgtgtggagctgc
ggatgcattcttggggaactgttcacaaagaaaccaatttttcaagcaaaccaggagctt
gcccagttagagcttatcagccgaatatgtggcagcccctgtcctgctgtctggccagac
gtcatcaaacttcccttcttcaacactatgaaaccaaagaaacagtacaggagacggtta
cgagaggagtttgctttcatccctccatctgccctggacctgtttgaccacatgctaaac
ttggaccccagcaaacgctgtacagctgaacaagcgctgggcagcgagttcctcaaggac
gtggacccagacaagatgcccccgccagatcttccactgtggcaggactgtcacgagctg
tggagcaagaagcgccggcgacagaagcagatgccggaggaagcggcggcccctaaggcg
ccacgtaaagagctgggccttgacgacagccgcagtaacaccccgcagggcttccctgct
cccggaggcgttaaagctccgaacacggctgcttcagcgctgctggacacaaagggtcca
aactcccagttaacccaggagcagctagcggtcctcctgaacttcctcgggcagaccaag
ggttcagccaacacggcccagtttgtccagtccatgggcacaaaggtcaaccaggaaacg
ttacagcagctctccaaagccctggcgcccaccgacccagccgagcctcctcctcaaccc
gcaccggcgaagnncctccccgccctctgcccccccgcaggcgtgccccgtacgcccccg
atgcccaagcctccttcgccccccatgtctgcaccgccgggtattccagaaggagaggcc
gcagctgccacgcagacggccatgacgatgctgatcgctcagctcctgcaggctcagcag
gctccgaggcaggagccgagcgacggtggagaaggggcggagagcgtcaaccctgcagga
gcagcagcaccaggaggtcagcctctacctccagaggtcaaacagcctccagagcccagc
cccgtctctccagtgtctgaagtaggtggcgtgtccatcctgcccccagaccagagacca
cctgagcctccagagccaccgccacacgccgacctggactaccggcagcctccacctgaa
cccaagactggccacgctccacctattgcgtctgcgggcggaggtgacggagggagaccc
ccagagccagactacccacccctccccaccgcagaggggcccggatacggcggagactac
ccatcccccccgccgcccttcactcctgcggggttcgtggacggttacatgggtcacatg
ttaggtggcggcctgcctcctcacgctctgagggaagtgttcagcggacctggcccggct
gctagctcctcatccgccgcggcccacccggaccccttccccccaggctctggagccacg
ggacccagcagcatggtgttcaccggagaccaggaccaccgttttaaatacaatcacagt
ccgttacctgtagagggaccacctaaccccagcgctatccacctgtacaaccacgccttg
gctagaaaggatggtgggcctcctccacccatcccagcaccgggacaaccctggggctcc
ccttcccaagtgggggctccgccactacccctcggcttcgtcccacacgtgaactcgaca
gcaacaatcaggggacgaggcctgcctttctga
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