Anoplopoma fimbria (sablefish): 129110834
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Entry
129110834 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
afb03000
]
129110834
Transcription factors [BR:
afb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
129110834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_15
Homeodomain
zf-H2C2_5
zf-met
zf-C2H2_16
zf-C2H2_6
Zn_SUZ12
Zf-C2H2_ZNF451_C
Motif
Other DBs
NCBI-GeneID:
129110834
NCBI-ProteinID:
XP_054479043
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All DBs
Position
21:complement(13603756..13652765)
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AA seq
1149 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNAVEAGSESDDEDKLHIAEEEGSLADGADGDSTPPE
EKHPREHCWDGVKEDCTSDAEDDGSTDALVEEMLQQGDTAVIYPEAPEDEQQRQGXPDAG
VHDENGTPDSFSQLLTCPYCARGYKRYSSLKEHIKYRHEKTEESFNCPECSYSFAYRAQL
ERHMTVHKGGRDQRHITQSGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCKK
RFSHSGSYSSHISSKKCISVISVNGRPRLGNAKTQAPSPALPTSPSALRTQIREKLEHSK
PLQEQLPLNQIKTEPVDYEYKPTFLTSQANAAMNGGVFNGGAAAPLQGTVQAVVLPTMGL
VSPISINLADLQNALKVAVDGNVIRQVLENNAKGQGQVNSGLTTGMLHPGQQQLISAISL
PIVGQDGNAKIIINYSLDPNQGQLMAHNLKKEPEPTSPGQTTTDNFKSQKLPEDLTIRGA
RPNETKEKEEKTTKTCLLCDNCPGGLEALHALKHCKKDGLRLNGAGLDKSESAVAALLSE
GGLCNQPKNLLSLLKAYFALNAEPTKDELAKISDSVSLPIHVVKKWFDKMQEGQISLGAP
TPPSEEEDTCEASSVVSLVPGKDKANMSPSGTQGSPTEATPAEVNGSHSTAASPSPLNLT
AGGPVPARPPQSTEGPLDLSLPKPAREEAERVLAVARIYPSLSSGSTSVDEPLNLTCTKK
EASPLSAMGASPIALYASQPGAKHLDIVTTMQCLRALATNNKQTILIPQLAYTYTTTASS
PAGTQTQETIHLNGVKEEKQDTGSEGVSTVEEQNDSDSGPPRKKMKKTDGGMYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKETQGQGEGRESPEEDAEARAEMEALSRLERLLAPSQLDLDERG
SSAREDEESEEEEEGAVDMDDIQVVQIGDEGGDEEEEEEERNEEETERVLEEGEGEEEGE
RVLEEGGGEEERNQKEMEMETELVEGEREEESNEEEIERVLVEGGEEEEKTEMEAEEEYE
EADSRREEVLASIQEEEEAKEEEEEAMDAEEGVTEEGKAEGEVTEGSGGETDTVSGEQNQ
TLQEKGDTD
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggaacaacgtg
accaactacaacaatgcggtggaggccggctcagagtccgatgacgaggacaagctgcac
atcgcggaggaggaaggcagcctggcggacggggccgacggcgacagcaccccgccggaa
gaaaagcaccccagggagcactgctgggacggagtgaaggaggattgcacgtcggacgct
gaggacgacgggagcacggacgccctcgtggaggagatgctgcagcaaggggacacggcc
gtcatctacccagaggccccggaggacgagcagcagcgccagggcnaccccgacgccggc
gtccacgacgagaacggaactcccgattcgttctctcagctgctcacctgcccgtactgc
gcacgaggctacaagcgttacagctccctgaaggagcacatcaagtaccggcacgagaag
acggaggagagcttcaactgccccgagtgcagctacagctttgcgtaccgcgctcagctg
gagcggcacatgacggtccacaagggcggacgggatcagagacacatcacacagtcggga
ggcaatcgtaaattcaagtgcactgaatgtggcaaagcatttaaatacaagcaccatctg
aaggagcacctacgcatccacagcggagagaaaccctacgagtgctccaactgcaagaag
cgcttctcccactcaggctcatacagctcccacatcagcagtaagaagtgcatcagcgtc
atctcagtcaacggcaggccgcgcttggggaacgccaaaacccaggccccgtcgccggcg
ctgcccacgtcaccctcggccctccgcacccagatcagggagaagctggagcacagcaag
cccctccaggagcagctgccacttaatcagatcaagaccgagccggtggactacgagtac
aagccgacgtttctaacgtcccaagccaatgctgccatgaacggtggggttttcaatgga
ggtgccgctgctcctctgcagggcacagtgcaggccgtggtcctgcccactatggggctg
gtgtctcccatcagcatcaacctggcagacctgcagaatgcactcaaagtggcggtggat
ggtaacgtcattcgccaggtgctggaaaacaatgccaaaggccaggggcaggtgaactcg
gggttaaccactggaatgctccatcccggacagcagcaactcatctcagccatcagtctg
cccattgtgggtcaggatggaaatgcaaaaatcatcataaactacagtttggaccccaac
cagggccagctcatggcccataacctgaagaaagagcctgagcccacctcaccaggtcag
accaccactgacaacttcaagtcccagaaactccctgaggatctaaccatcaggggagcc
aggcccaatgaaactaaagaaaaagaggaaaagaccactaaaacttgtctcctgtgtgat
aactgtcccggtgggctggaagcactccatgccctcaagcactgcaagaaggacggtctc
aggctgaacggagcgggcctggataagtctgagtctgctgtcgctgccttgctatcagag
ggaggactctgcaaccagcccaagaacctcttgtccctgctcaaggcctactttgcctta
aatgcagagcccactaaggacgagctggcgaagatctctgactcagtcagtctgccaatc
catgtggttaagaagtggtttgacaaaatgcaggagggtcagatatcactgggtgccccg
acacctccctcggaggaggaggacacctgtgaagctagcagcgtggtgtcgctggtccca
gggaaggacaaggccaatatgagcccttccgggacccagggcagcccaacagaagccacc
ccagcagaggtcaatggctctcacagcacggcggcctccccctcaccactaaacttaaca
gctggcggtcccgtcccagcccggcctccccagagcactgagggacccttagacctgtcg
ctgccaaagcccgccagagaggaagcagagagagtgttggctgtagcccgcatttacccc
tccctttcctctggctctaccagtgtggatgaacccctaaacttaacttgcacaaagaaa
gaggcatcgccactctcagccatgggcgccagccccattgcactgtacgccagccagcca
ggtgccaaacacctcgacattgtgaccacaatgcaatgcctacgggcactcgccactaac
aacaaacagactatcctgatcccccagctggcttacacctataccactacagcaagcagc
cctgctgggacccagacgcaggaaaccatccacctcaacggagtgaaggaggagaagcag
gacacgggctcagagggcgtgtccacggtggaggagcagaacgactccgactcgggcccc
ccgcggaagaagatgaagaagactgacggcggcatgtacgcctgcgacctgtgcgacaag
atcttccagaagagcagctcgctgctgagacacaaatacgaacacacggggaagcgacct
cacgagtgcggcatctgcagcaaggccttcaaacacaagcaccacttgatcgaacacatg
cgcctccactcgggggagaagccgtaccagtgcgacaagtgcggcaagcgcttctcccac
tcgggctcctactcccagcacatgaaccaccgctactcctactgcaagaaggagacgcag
ggccaaggcgaaggccgggagagcccagaggaggacgccgaggcccgggccgagatggag
gccctgagccggctggagcggctcctggcgccctcccagctggacctggacgagcggggg
agcagcgcgagggaggacgaggagagcgaggaggaggaagagggcgcggtggacatggat
gatatccaggtggtgcagataggggacgaaggaggggatgaagaggaggaggaggaagag
aggaatgaggaggagacggaaagagtgttggaggagggagaaggagaggaggagggagag
agagtattggaggagggaggaggagaggaggagaggaatcagaaggaaatggagatggag
acagaactagtggagggagaaagagaggaggagagcaatgaggaagagatagagagagta
ttggtggagggaggagaagaggaggagaagacagagatggaggccgaagaggaatacgag
gaagctgactcaaggcgggaggaggtgctcgcgagcattcaggaagaggaggaggccaag
gaggaggaagaggaggcgatggatgcagaggaaggggtgacggaagaggggaaagcagag
ggggaggtcacagaggggagtggaggcgaaacagacacggtttctggagagcagaaccag
acgctgcaggagaaaggagatactgactga
DBGET
integrated database retrieval system
