KEGG   Anoplopoma fimbria (sablefish): 129110931
Entry
129110931         CDS       T09102                                 
Symbol
chmp4c
Name
(RefSeq) charged multivesicular body protein 4c
  KO
K24782  charged multivesicular body protein 4C
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04144  Endocytosis
afb04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    129110931 (chmp4c)
  09143 Cell growth and death
   04217 Necroptosis
    129110931 (chmp4c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:afb04131]
    129110931 (chmp4c)
   03400 DNA repair and recombination proteins [BR:afb03400]
    129110931 (chmp4c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:afb04147]
    129110931 (chmp4c)
Membrane trafficking [BR:afb04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    129110931 (chmp4c)
DNA repair and recombination proteins [BR:afb03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    129110931 (chmp4c)
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   129110931 (chmp4c)
  Exosomal proteins of colorectal cancer cells
   129110931 (chmp4c)
SSDB
Motif
Pfam: Snf7 DUF155 DUF6437 DksA-like_N
Other DBs
NCBI-GeneID: 129110931
NCBI-ProteinID: XP_054479179
LinkDB
Position
21:7498650..7501422
AA seq 234 aa
MSKIAKLFKGSSSSSSSSSSSSKSKHHRSRGGPSPQEAIHKLRETEEMLTKKQDYLEKRI
EQELMIAKKNGTKNKRAALQALKRKKRLEQQLTQIDGTLSTIEFQREALENSHTNTEVLK
NMGFAAKAMKQVHENMDIDKIDDLMQDINEQQDVAREISDAISGPFGETYDEDELLAELA
ELEEEELQDTMKSMGGLPSVPSSKLPSAKSSHRATTKKRVEDDDDMRMLASWAT
NT seq 705 nt   +upstreamnt  +downstreamnt
atgagcaaaatcgcgaaattattcaaggggagctccagctccagctcgagctcatcgagc
tcctcgaagtccaaacaccaccggtcgcgaggaggaccttcaccacaagaggccattcac
aaactcagggaaaccgaggaaatgctgaccaagaaacaagactacctggagaagaggata
gagcaagaactaatgatcgccaagaagaatggcacaaaaaacaagcgagctgccctgcag
gccctgaagagaaagaagcgtttggagcagcagctcacgcagatcgatggcacgctctcc
accatcgagtttcagagggaggctttggagaactcgcacaccaacaccgaggtcctgaag
aacatgggctttgctgccaaggccatgaagcaggtccacgagaacatggacattgacaag
atagatgatctgatgcaggacatcaatgagcagcaggacgtggcccgagagatcagcgat
gcaatctccggacctttcggagagacatatgacgaggatgagctgctggcagagctggca
gagcttgaagaggaggagcttcaggacaccatgaagagtatgggcggactacccagcgtg
cccagctccaaactgccttcagctaagtccagtcaccgcgcaacaaccaagaaaagggtt
gaagatgatgacgacatgcgtatgctggcatcgtgggcaacttaa

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