Anoplopoma fimbria (sablefish): 129111039
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Entry
129111039 CDS
T09102
Symbol
u2surp
Name
(RefSeq) LOW QUALITY PROTEIN: U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129111039 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
afb03041
]
129111039 (u2surp)
Spliceosome [BR:
afb03041
]
Complex A
U2 snRNP components
U2 related factors
129111039 (u2surp)
Complex B
129111039 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
129111039
NCBI-ProteinID:
XP_054479306
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All DBs
Position
21:complement(8447745..8457266)
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AA seq
973 aa
AA seq
DB search
MADRTPGGSQKASAKALLESKLKSFSIGKMAVGKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGEGKVKAFVRGGIANASKEEAAADEKKGKLYKPKSRFENQTKSFLPLDTPPQF
LPIDKRTPVKKITEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLSGTDGRRS
SDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVK
IMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPIY
IPPSMMEHTLPPPPSGLPFNAQPRERLKNPSAPLLPPPKNKEEFEKTLSQAIVKVVIPTE
RNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQGPAHVYYRWKLYTILQGE
APVKWKTEDFRMFKNGSLWRPPPLNPYLHGPYDDGEEEEEDEDGSKKGCLKEDERDKLEE
MLRGLTPRRGDIAEAMLFCLSRADAAEEIVECVTESLSILKTPLPKKIARLYLVSDVLYN
SSAKVSNASYYRKFFETKLCQIFADLNSTYKSIQGHLQSENFKQRVMSCFRAWEDWAVYP
DPFLIKLQNIFLGLVNISAEKEPPVVIVEAEPAEDIDGAPIGEYVDGALLEDVDGVPIDA
GPIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDPSKEATFKVAPSKWEAVDESELESQA
VTTSKWEAFEQPEETKKDEEDSDYDERSPRSDDNQSYSNPVREDSDVKAKMSEMNEEKRT
KLREIEVKVMKFQDELESGKRPKKPGQSIQEQVEHYREKLLQKEKEKEKLEREKEREKKE
KEKADARLKDLKKEKEKDDTPTRKERKRRHSGSPSPTRSSSRRGRSSSPRSERSERSERS
DRSYSKDTSSRTTHKDSPRSTTTKKASKRSPSPRTPKRSRRSRSKTPKKSAKKSRSKSRS
PHRSHKKSKKSKH
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccgaacgcctggtggctctcaaaaagctagcgctaaggcgttgcttgagagc
aaattgaagtccttcagcattggcaaaatggcagtgggaaagaggaccctaagcaagaag
gaacaagatgaaataaagaagaaagaggatgagcgggcagcagcagagatttatgaggag
tttcttgcggcttttgaaggaggagagggcaaagtcaaggcttttgtccgtggtggtatt
gcaaatgcatcaaaagaggaggcagctgccgatgagaagaaaggaaagttgtacaagccc
aagtcacgttttgagaaccaaacaaaaagcttcttacctttggataccccgcctcagttt
ttgccgatagacaaaagaactcctgtgaagaaaattactgaaaaggaaaagaagaagagc
aacttggagctcttcaaagaagaacttaaacaaatacaggaggaaagggatgaaagacac
aagctgaaaggacgtgttagtcgtttcgaacctctctcgggcacagacggaagacgctca
tcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgtgcgccaggt
tcccatgatgttggagacccatccactactaacttgtatctcggaaacatcaatccacag
atgaatgaggagatgctgtgtcaagagtttggccgttatggtcctctggccagcgtgaag
atcatgtggccaagaacagacgaggagagggctcgggagaggaactgtggttttgttgct
ttcatgaacaggagggatgctgagcgagctctcaagaacctaaatggaaagatgataatg
aactttgagatgaaattaggatggggcaaaggtgtgcccatcccaccccaccccatctac
atccctccttccatgatggagcacacactcccaccgcctccctctggcctacccttcaat
gcacagccccgggagaggctaaagaaccccagcgctcccttgcttcctccacctaaaaac
aaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaa
aggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggcccaatg
tttgaagccatgatcatgaacagagaaatcaacaaccccatgtacaggtttctatttgag
aaccaaggcccagcacatgtttactaccgctggaagctctacaccatattacagggtgaa
gcaccagtcaaatggaaaacagaggacttcaggatgtttaagaatggctccttgtggcgt
ccgcctcctcttaatccgtacctccatggtccttatgatgacggtgaggaagaggaggaa
gacgaggacggcagcaagaaaggctgcttgaaagaagacgagcgggacaaactagaggag
atgctgcgtggtttgactcccaggaggggagacatagcagaagccatgttgttttgcctc
agccgtgccgatgccgctgaagagattgtggagtgtgtcacagagtctctctccattctc
aaaacccctcttcccaagaagattgcacggttatatctagtttctgatgtgctgtacaac
tcttctgccaaagtatccaatgcgtcttactacagaaaattttttgagacgaagctatgc
cagatttttgcagacctcaactcaacatacaaatccatacagggccaccttcagagtgag
aactttaagcaacgggtcatgtcatgtttccgggcatgggaggactgggctgtgtatccg
gaccccttcctgatcaagctgcagaacatcttcctgggtctagttaatatctctgcagag
aaggaaccccctgttgtcattgtggaggctgagccagcagaggacattgatggggctcca
ataggggagtatgtagatggagctctgctggaggatgtggatggagtgccgatagatgca
gggcccattgatggagctcctattgacggagccccactggatgatctagatggtgttcct
atcaagcccatggaagaagacatagatggaatacctttggatccgtccaaggaggcaacc
ttcaaggtggcaccctcaaaatgggaggcggtggatgagtcggagttagaatctcaagct
gtgacaacttcaaaatgggaggcattcgagcagccagaagaaacaaaaaaggatgaggag
gacagtgattatgatgaaaggagccctcgctcagatgataatcagagctactcaaacccc
gtcagagaggactcggatgttaaggccaaaatgtctgaaatgaatgaggagaaacgcaca
aagctcagagaaatagaggttaaggtaatgaagttccaagatgagctggagtctgggaaa
aggcccaagaagcctgggcagagtattcaggagcaagtggagcactacagggaaaaatta
ctacaaaaggaaaaggaaaaggagaaacttgaacgggagaaagagagggagaagaaagag
aaggagaaagctgatgcgcgtctgaaggacttgaagaaggaaaaagaaaaggacgacacg
ccaaccaggaaagagaggaagcggcgtcacagtgggtcacccagcccaacgaggagtagc
agccgacgagggcggtcatcctcaccccgttcagagcggtccgaaagatcagaacgctcc
gaccgctcgtattctaaagacacatcttcccgcaccacccataaagactccccgcgatcc
acaacaacaaaaaaggcctcaaagagatctccttcccctcgaacacccaaaagatccagg
aggtcgcgctctaagacgcctaagaaatcagcaaagaagtcccgctccaaatcaaggtca
cctcaccggtctcataagaaatcaaagaagagcaaacactga
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