Anoplopoma fimbria (sablefish): 129111124
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Entry
129111124 CDS
T09102
Name
(RefSeq) polycystic kidney disease 1 like 1
KO
K04987
polycystin 1L1
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
afb03037
]
129111124
04040 Ion channels [BR:
afb04040
]
129111124
Cilium and associated proteins [BR:
afb03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129111124
Ion channels [BR:
afb04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129111124
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
PKD_channel
Polycystin_dom
PKD_4
PLAT
GPS
WSC
ig
Ig_3
Motif
Other DBs
NCBI-GeneID:
129111124
NCBI-ProteinID:
XP_054479391
LinkDB
All DBs
Position
21
Genome browser
AA seq
2921 aa
AA seq
DB search
MFGAFVSTLILLDRISHRSSVAVLPPDPKNAPWFMGCFNASSSLYTSKGGRDLDPVTCSV
LCLDKGYQVAALTSEACYCGNQQHGLVASECFNTSSNGGTKDVRKERQSVPYLPVGGEKG
IVALYRTKGPFLHSIHLSTSPDRVQAGKTFVIEVSGTLVGRPNQPTDVSVSNPLSTVSSV
LHLSVLQPSADSLEVSVIHGPLGVPSCIAFPQKDSNGVTVEAAYLDDHVTLQAHMADGLA
VEFFWWIAHKKEEKNMEAVETVCLPNSDCLISTVNWTFETEGVHMVSVNASSAYGWTQQT
IHIVVVPLAVSDLRVSVSENRLTSEEVVSVDVEMFTTMKHLLLLNLTLNAEHVQIFAAKQ
AYPTNTDITFLAMAGVPDPVGFLWHFGDSRSDRTTSRTVTKRYQKPGRYAVVVVMSSGRT
SFTSNVFPLVVQRAVKLNRLVHQASVLQNQTVTLSCRVNVGTDVTFLWSFGDGSSRLGKS
TEQHVFHTTGEFRLKVTVSNLVSSVSLSGLIFVVDRPCQPPPVENMGPLKLQVRRYEVIR
LGVTYEMELDCDISGGLHYTWTLFDSAGRVFPLPLVDTHRQSLTLPSHLLHYDTYTATAR
VQVAGSVVYSNYSVRVQVIPSPPVAFIQGGTNIFINKWNNTTVTLDGQGSYDPDFPMNPI
SFSWTCKPVSSITSSCFHHDVPTSSPLLVFPASFLKHNFDQFQFTLTIHSGERSASSETF
LTLTPKVIGKMSVYCRQCQGDQVNWHQSFSVSALCEGCDIYSKNIQYTWSLFLVNASSKP
VIDVPFCHTVDLSAPFNIMEGPATSPQTLGISTQNPPAPGASQYTYTVDTSAPVNLIENA
SDTSMADLTEPDPSPISSLVDIRTEGSGEEPFYHPLGEFDPPKPLYSSTEYPLLDFDNSG
VLYSDHFLQGDVISEFPNDSDFSADWEFSFPVLETGDLGGQQDSDYDVPLMSAEEGDPGV
SAGRPTGVDGESFSPGDDSFHDPTLHEDEGNNLIDSRPSVVIQEPVLLDLPRDPADRGLF
ESYTFTGISSPLLGFRPFSLNPGSRYMLEITAKSHNSFLGRTQLFLKTNPAPKGVTCQVQ
PVKGMELYTHFSIFCTSGKEDLLYEYSVSVGDGPPRTLYKGRDFQYYFSLPSGDPNDDHK
VTIYTEIRSSIYGAASKPCPVTIQVQPSFFRDASSSSHLDPDLELSESGLRNLSALVCLG
NSVEIRNYVSLLSSILNRLSLDPKVNTHAQRRTRNVLICTMCELESTGEAAMVDNICILK
NLLEVTSQVTLVSARRVTVHVQLISEQFLDSSASVWHSQKTLNTLVALLSYSLQAALTSN
DFTSEMSTSDDIIQSLESDPHDEIQDSTSGIYMEQGLSVSTKQALQLVADILQTASDLML
YILTHEAYEYRVNTGLLALYATYLNQTSTVLSSGSTTFYMPDSLIQLLFVHRSRETERRL
HRPCVLSVLTELTHSPYTWAHYPGTLSGPVVDLSLYKCSTRRKIPVRSLIQPINIELKQP
PRNSSVTEYILLRSQVNYHTFNITQEHLQQAIQLSVVFLQPLNKVFPIMLLFRMFERPTP
SMHHLHRIHHWDSNTTRFTLPPSYLSAAGVGHLALLNADFGKTPRHKHLNEQVSYSLTVD
SSLCLSWDGHQGAWTHHGCRTQQADSATAVNCSCHQLRPLTVVQKQIQSSHDTTSLDPFL
SVSNDLTVLVVLVFCVCLYILGLVVCKRADVVSEWNQRVHYISDNSPCDPYLYAVTIHTG
LCSAACMSAKVYIVLKGEDGFSQTRELQVPGCTLFRRNSQDTFILSAADSLGPVWGVHIW
HDNSGPSPNWYLKQVEVSEVSRGHVKGRVWLFVGQCWLAVNQADGRVERRLRVCTHAIGF
AKMLCLKLSDYLADYHIWISLYTCPCPNSFTHTQRLSVSLLLLLGYACVNAVIISQMNNR
LPFELGIIDLSAVSLTTGVLSVVAALPVAAIISFLFRLREVKLMGSATDLLSVSTTILEN
KNTVNKPEIQSDVVTRKEDSLEVKNYIGPMLQNVLLITERNNVDQPPGGKEVDILNESNR
FPGTEGANLSGPRDGGHAFQKEEDHQGNFSSDCSLKEDRYHQAAWPAHDIDKLKGRELRP
LSQWSHYLAWTLCLLLSLTCLVLSAVLGLRFSSSKVLLWIHSLFFSLVFCIFLIQPAVII
TMAVTVSFWHRKRSDFHSLFSIREIEKDTSKLWSHNGAKQPAEQFGTSTFPQERGSYLEK
LLGARQRARYLHLVRPPTPSELRKTSGKKRRETLIHYTLRDLSLCGSMLFLMLCISYGTS
FTEHYHLNKAVRKQFLSGHDKAFMSIQKHEHWWRWAESSLLNILYKNTSSTTASHILIGE
PILCKTEVSNSFQGQSMTTQVLVPMATPPKMSGDLGCYLGSSTTVSLGHTKSDAASKLKL
LHSGVWLCRHTVSVQFTLFSPAPNLFTSVTMLIEQSPIGVLLPSAKVQSVRVYHTPAVWD
YLVMVCQLLFLILSLLQLCDQVYAIGQQGLMGYWRTPFSCLEVSLLTVSLVYYVYCIYHS
IIILEVVELLQRHSYRGHVDVSLLATLEQYIRSLRGVTLLLLTMKCVTVLRMNRTLASSA
TLLTRSLSSLFWPTISGLILTMALACVGNLLFVQTSWAFSSLPRSLQTLLGHCWGFRAVR
DLVFSGRDFLYRGVLYMSSVVWKALVIGVVSSLVRSAKRSQSWGNVFTLAELTDYIRRTV
SERIGQRRLAWIENHVEGRTYFFEEFDSLLDELLFRLNALSDSLHQTLPPKAHHYREEDS
PVILQEPSNMDAQDFVRTQKTERAMMNDNTHVSSHGESLPISCLLRSKLEPEILERGQRG
DHSSSDSVVKSDASKQPETIAKENTKGRELQTYLKAQKYISLPESTSRISGWTEDVLEKQ
VNEWTTTNDMYCLGKTQATHTEVEVEVLVHQEPVSVRPDKQ
NT seq
8766 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgcttttgtctccacacttattttattggataggatttcccatcgctcctct
gtggcagttcttcctccagatcctaagaatgcaccgtggttcatgggctgcttcaacgcc
agcagcagtctttatacaagcaaaggtggccgtgaccttgacccggtaacatgctctgtt
ctctgcctggacaaagggtaccaggttgcagcgttgacctcagaggcttgttactgtggc
aaccagcaacatggtttggttgccagtgagtgtttcaacacatcttccaatggagggaca
aaggatgtcagaaaagaaagacaaagtgtcccctacttgcctgttggaggagaaaaggga
attgtggcactctacagaaccaaaggaccatttctgcacagcattcacttgtctacgtct
ccagacagagtgcaggctgggaagacttttgtcattgaagtttctggaactctggttggt
cgccccaaccagcccacagacgtcagtgtctccaaccccctctcaacggtctcctccgtc
ctccacctctccgtcttgcagccctctgcagacagcttggaggtctctgtgattcatggg
cccctgggtgtcccctcttgcatcgctttcccacagaaagactccaacggtgtgactgtg
gaggcagcatacctggacgaccatgtcacactacaggcacacatggccgatggtctagca
gtggagtttttttggtggatcgctcacaaaaaagaagagaaaaacatggaggctgttgag
acagtttgccttccaaactcagactgtttgatcagcactgtgaactggacctttgaaaca
gagggagttcacatggtgtcagtgaacgcctccagtgcctatggatggacacagcagacg
atccacattgtggtggtgcctctcgcggtctctgacctcagagtgagtgtatccgagaac
aggctgacttctgaagaggtcgtgtctgtggatgtagagatgttcaccaccatgaagcac
ctactgctcctcaaccttacactgaacgctgagcatgtgcagatttttgcagcaaagcaa
gcttatcccacaaatacagatatcactttcctggccatggctggagttccagaccctgtg
gggttcctttggcactttggagactccagatcagacagaaccacctcaagaaccgtcacc
aaaagataccaaaaacctggcaggtatgctgtagttgtagtcatgtcaagtggccggacc
tcctttacctccaatgtgttcccgctggtagtccagagagcggtgaagctcaaccggctg
gtccatcaggcttctgtcctgcagaaccaaaccgtaacgctgagctgccgggtcaatgtg
gggactgatgtcacctttctctggagctttggagatggatcctcccggctgggaaagagc
acagagcagcacgtcttccacacgacaggagagttcagactaaaagtaactgtgtccaat
ctggtcagttctgtctctctaagtggtctcatctttgttgtggacaggccttgtcagcct
ccaccagtggaaaacatggggcctctaaaactacaggtgcgaagatatgaggttatccgt
ctaggagtgacctatgagatggaacttgactgtgacatttcaggaggccttcactacacc
tggaccttgtttgactccgcaggacgggtcttccctttgcctctagtagacacacacaga
cagagcctcacactgcccagccatctcctgcactacgacacttacactgccacagctagg
gttcaggtcgctggaagtgtggtgtacagtaactacagtgtaagagtgcaggtgataccg
agccctcctgtagccttcatccagggtggcaccaacatcttcattaacaagtggaacaac
accacggtaaccctggacgggcagggatcttacgacccagacttccccatgaacccaatc
agcttcagttggacgtgtaaaccagtcagctccattaccagctcctgtttccaccatgat
gttcccacttcatcccctttgcttgtatttcctgctagtttcttaaaacacaactttgac
cagttccagttcacgctcaccatccacagcggtgagcgttcagcttcatcagagaccttc
ctcacattaacaccaaaagtgatcgggaagatgtcagtttactgccgtcagtgccaggga
gaccaggtgaactggcatcagtctttctctgtcagcgccttgtgtgaaggctgtgatatt
tattccaaaaacatccagtacacctggagcctgttcctggtcaatgcatcatccaagcct
gtcatagatgtcccattttgtcacacagtggatctcagtgctccgtttaacatcatggag
ggtcctgccacttcccctcagactcttgggatttccacccagaatccacctgctccaggt
gcttcccagtacacctatacagtcgatacctccgctcctgttaatctgatcgagaatgcc
tctgatactagtatggctgatttgacagaacccgatccctcgcctatctcttctctagta
gacataagaacagaaggatcaggagaggagcccttttatcaccctctgggggagtttgac
cctccaaagcctttgtactcctccactgaatacccgctacttgactttgacaacagtggc
gtcctatattcagaccactttctccagggtgatgttatcagtgaattcccaaatgattct
gacttctctgctgactgggagttttcgtttcctgtcctggagaccggtgacttgggaggt
caacaagattcagattatgatgttcccttgatgagcgcagaggaaggggacccaggagtc
tcagcaggaagacccacaggtgtggatggtgagagcttcagtccgggagatgattcattt
catgatccaacactgcatgaagatgaggggaataatctgatagattccagaccatctgtt
gtgatccaggagccggttttgctcgatttacccagagatccagcagacagaggccttttt
gagtcctacactttcaccggaatttcctcacctttgctcggcttcagaccgttcagtctg
aatcctgggagcagatacatgttggagatcactgccaaatctcataatagttttctgggc
cggactcagctattcttaaaaaccaaccctgctccaaaaggggtgacgtgccaggtccaa
ccagtcaaagggatggagttatatacacacttcagcatcttctgcacctcagggaaagag
gacttactgtacgagtacagtgtcagtgtaggggacggacctcccaggacgctgtataag
gggagagacttccagtactacttcagccttccttctggggacccgaatgatgaccataaa
gtaactatttacacagagatcagaagcagcatttatggggcggcatctaaaccttgtcct
gtcaccatccaagtccaaccaagcttcttcagagatgcatcttcttcttcccatcttgat
cctgatctggagctttcagagtcaggtctgaggaacctctcagctctggtgtgtcttgga
aacagtgtggagattcgtaactacgtcagtcttctctccagcattctcaacagactcagt
ctagaccctaaggtcaacacacacgcacagagacgcacacgcaatgtgctcatttgcacg
atgtgtgagcttgagagcactggagaggcagcaatggtggacaacatctgcattctgaaa
aaccttttagaagttacaagtcaggtgacattagtgagtgcaagacgagtgaccgtccac
gttcagctcatctcagaacagtttttggattccagtgcttcagtctggcactcacaaaag
acactcaacaccctggtggccctgctctcatacagcctgcaagctgctctcactagtaat
gacttcacatctgaaatgtccaccagtgatgacattatacagtcattagagtcagaccca
catgatgaaatacaggactcaaccagtggtatttacatggaacaaggattatcggtttca
acaaagcaggcgctgcagcttgtagctgatattctccagactgcttcagacctgatgctg
tacatcttgacccatgaggcttatgaatacagagtcaacactggtcttctcgccttatat
gccacatacctcaaccaaacctccacggtcctcagcagtggctccaccaccttctacatg
cccgactccctgatccagctcctgtttgttcatcgcagtagagagactgaaagaagactg
catcggccgtgtgtgctcagcgtgctgaccgagctcacccacagcccttacacctgggcc
cactatcctggaacgctaagtggaccagtggttgacctcagtctatacaagtgcagcacg
aggagaaagatccctgttcgctccctcattcagccaataaacatcgagctgaaacaacca
cctagaaacagctctgtgactgagtacatcctcctacgcagccaggtcaactaccacacc
tttaatattacccaggagcacttgcagcaggccatccagctgagcgtggtgttcttgcag
ccgcttaacaaggtgtttcccatcatgctgctcttcaggatgtttgagaggccgactccc
agcatgcaccatctgcacaggattcaccactgggacagcaacaccacacggttcactctg
cccccatcctacctcagtgctgcaggtgttggtcacctggccttgctgaatgctgacttt
gggaaaacacccagacacaagcacctaaatgaacaggtaagctacagcctcacagtggac
agcagcctgtgtttgtcttgggatggccaccagggggcctggacacaccacggctgcagg
acacagcaagcagactcagctactgcagtcaactgcagttgtcaccagttgaggccgctg
actgtggtgcagaagcagatccagagcagccatgacacaaccagtctggacccgtttcta
agtgtttccaatgacctgactgtgctggtagtgctggtgttctgtgtatgtctttacatc
ctggggttggtggtgtgtaagagagctgatgttgtctctgaatggaatcagagagtacac
tacatttctgacaactctccctgtgacccatatctttatgctgttacaatccacactggt
ctctgctctgcagcctgcatgagtgcaaaggtttacatagtgctgaagggggaagatggg
ttctcacagacaagagaactacaagtccctggatgcactctgttcaggaggaactctcaa
gacacctttatattaagtgcagcagacagcctgggcccagtgtggggggttcacatctgg
catgacaactctggaccctcccccaactggtacctcaaacaagtggaggtatccgaggtg
agcagagggcatgtgaaaggacgtgtttggctctttgtgggtcagtgctggttggctgtg
aaccaagctgatggccgggtggagagaaggctgcgtgtttgcactcatgcaataggcttt
gctaagatgttgtgtctcaagctatccgactacttggccgactaccacatctggatatca
ctttacacctgcccctgccctaactccttcacacacactcagagacttagcgttagcctt
ctgctactgttgggatacgcatgtgtcaacgcagtaatcatatcacaaatgaataatcgg
ttgccattcgagctgggcattatagatctgtcagctgtttctctgaccacaggagtatta
agtgtggtggcagcattgcctgtagcagcaattatatctttcctgttccgactgcgtgag
gtcaagctgatgggatcagccacagacctgctgtcagtgtcaactacaattctggaaaat
aaaaacacagttaacaaacctgaaatccaatcagatgttgtcacaagaaaggaggactct
cttgaagttaagaactacatcggaccaatgcttcaaaatgtgttgttaattactgagaga
aacaatgttgatcaaccacctgggggaaaagaggtcgatattttaaatgaaagcaacagg
tttcctggaaccgaaggagctaatttgtccggaccaagggatggaggtcatgcttttcag
aaggaagaagatcatcaagggaacttttcttcggactgcagcttaaaggaagaccgctat
caccaggcagcgtggccagcacacgacatcgacaagttgaaagggagagaattgagaccg
ctatctcagtggtctcactatctggcctggacactgtgtctgctgttgtccctcacctgc
cttgtgctttctgcagtgctgggattgaggttcagcagcagcaaagttctgctatggata
cactctcttttcttctccctggtgttttgcatcttcctcatccagccagctgtgattatc
acaatggcagtgactgtttccttttggcacaggaaaagatcagactttcatagcttgttc
agtataagagagattgagaaagacacttcaaaactgtggagccacaatggtgctaagcaa
ccagcagagcagtttgggacatctacctttccacaggaaagaggctcgtatcttgaaaag
ctgcttggagctcgtcagcgagcccggtacctccatcttgtgcgcccaccaacaccatca
gagctgaggaaaacctctgggaagaaaagaagagagacacttatccattacactctcagg
gatttatcactctgtggctccatgcttttcctgatgctgtgtataagttatgggacctca
ttcactgagcattaccacctcaataaagctgtcagaaaacagtttctaagtggccatgat
aaagcatttatgtccatacaaaagcatgagcactggtggaggtgggcagagagcagtctc
cttaatatactttacaagaatacgtcatccacaactgcgtcacacatcttgataggagag
ccaatcctgtgcaagacggaggtgtccaactcatttcagggccagtctatgactactcag
gtcttagttcccatggcaacgcctccaaagatgagtggtgacctgggctgctacttggga
tcaagtactacagttagcttaggccacaccaagtctgatgctgcgtccaaactgaagctc
ctgcattcaggtgtctggctttgcagacatactgtgtccgtccaattcaccttgtttagc
cctgcacccaacttgttcaccagtgtgaccatgcttattgagcagagccccatcggggtg
ctgctgccctctgccaaagtccagtcagttagggtgtatcacactcctgctgtatgggac
tatcttgtcatggtgtgccagctcctcttccttatcttgtccctgctgcaactctgtgat
caagtgtacgctatagggcagcaagggctgatgggatactggaggacaccttttagctgt
ctggaagtcagtttgctgacagtatctttagtgtactatgtttattgcatctatcactcg
attattatcttggaggttgtggagctgctccagagacacagctacagaggacatgttgac
gtcagcctcctggccaccttggaacaatatattcgatctctgcgtggcgtcacgctgctg
cttctcaccatgaagtgtgtgactgtgttgagaatgaacaggaccttggcatcctctgct
acactcctcacccggtcgctctccagccttttctggccgacgatttcaggtcttattctg
acgatggcgctggcctgcgttgggaatctcctgttcgtacaaacatcctgggccttcagc
tcacttccccgctcccttcagaccctgctcggtcactgctggggtttcagggccgttagg
gatcttgtcttttctggccgtgatttcctttaccgtggagttctctatatgtcctctgtg
gtgtggaaagcattggtgataggtgtggtgtcctcattggtcagaagtgctaaaagatct
caaagctgggggaatgtcttcaccctagcagaattaaccgactacatcagaaggactgtc
tctgagcgcattgggcagcgtagactagcatggattgaaaatcatgtggaagggaggact
tatttctttgaagagtttgacagcttactagatgaactattgttcagactcaatgccctc
tcagacagtctgcaccaaactctgccccccaaagcccatcactacagggaggaggacagt
cctgtcatcctacaggagccctccaacatggacgcacaggactttgtaagaacacaaaag
acagaaagggcgatgatgaatgataacacgcatgtcagtagccatggagagagcttacca
atatcttgcctgctcaggtccaagcttgaaccggaaatactggagagaggccagagggga
gaccattcctcctccgacagtgttgtgaaatcagatgcttcaaaacaacctgaaacaata
gcgaaagaaaatacaaaaggccgagagctccagacatatttaaaagcacaaaagtacatc
tccctcccagagtcaacatcacgcatcagtggttggacagaggatgttctggagaagcaa
gttaacgaatggactacaacaaatgacatgtactgtttaggtaaaacacaggccacacat
acagaggtggaggtggaagttctagtccaccaggagcctgtgagtgtaaggccagataaa
cagtag
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integrated database retrieval system
