Anoplopoma fimbria (sablefish): 129111486
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Entry
129111486 CDS
T09102
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
afb
Anoplopoma fimbria (sablefish)
Pathway
afb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129111486
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
afb02000
]
129111486
Transporters [BR:
afb02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
129111486
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GFIT
Motif
Pfam:
SSF
FACT-Spt16_Nlob
Motif
Other DBs
NCBI-GeneID:
129111486
NCBI-ProteinID:
XP_054479431
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Position
22:9458923..9461740
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AA seq
550 aa
AA seq
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MALSIPGLIMMVAFYLLVLGIGIWASVKSKKMEKKTPGGQVEVSFLANRSVSLVVGVFTM
TATWVGGAFIIGIAEAVYDPTKGLIWALVPLQTSIAFIIGGLFFAKPMRENNYVSMMDPF
QRKYGKGLTAALAIIPVITEVVWIPALLISLGATMSVVIDLPFSACVWISAVVAIIYTVL
GGLYSVAYTDVIQISLVFLSLWLCVPFVLTSDIYTDISETAFNRTYQGSWVGRLEYDDVG
IWIDNFLVMSLGNMAIQDFHQRTLSSRSTSTARIICFIAAGAVIVVGIPSVLIGAVAAST
DWNATSYGSPSPYERGESAMVLPIILQNLTPTYIFAFGIGAVAAAVMSSADSYLLSATTI
FTTNIYQTIRSQASDKELQWVIRLSIVAAGLVGTSLTYLDSSIMVFWILGADLTYTIMLP
QLICVLFIRVSNGYGAAAGYVVAFVMRVLCGEPVFKLPVILAFPGCTSEDGVYVQRAPFK
TICMLSALTSILVFSYVASLLFNKGILHERWDVFKVKSQEELRPAEGAREADGEKTDAPN
ENKPMLDTGC
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctctcagtatcccaggtctgatcatgatggtagcattctacctgcttgtgttggga
atcggcatctgggcgtctgtgaagtctaagaagatggagaaaaagaccccaggtggacag
gtagaggtttcttttttggccaaccggagtgtcagcttggtggtgggggttttcacaatg
acagctacttgggttggaggtgcttttatcattgggattgcagaggcggtttatgacccc
actaagggtctaatctgggctcttgttcctctgcaaacgtccatcgcatttatcatcggt
ggactgttctttgcaaagccaatgagggagaacaattacgtcagtatgatggatccgttc
cagaggaagtatggaaaaggactgactgcagctcttgccatcattccagtcatcactgaa
gttgtctggattcctgctttactcatttccttgggagcgaccatgagtgtggtcatcgat
ctgcccttcagtgcgtgcgtgtggatctctgccgtagtcgccatcatctacaccgtgctc
ggaggtctctattcagtcgcttacaccgatgtcatccagatctcactggtgtttctgagc
ttgtggctgtgtgtcccttttgttctgacgagtgacatttatactgacatcagtgaaaca
gcgttcaaccgcacataccagggctcctgggttggccggctggagtatgatgatgttggg
atatggattgataattttctagtgatgtctttgggcaatatggccattcaggatttccat
cagaggacgctgtcctcccgctccacctccacagccaggatcatctgtttcatagcagca
ggagccgtcatcgttgtaggaatcccatctgtgctgatcggagctgttgcagcttcgaca
gactggaacgccacctcatacggttctccttctccatatgagcgaggggagtcggccatg
gtgttgcccatcatccttcagaatttaaccccgacctacatctttgcttttggcatcgga
gcggttgctgctgcagtgatgtcatctgctgactcttaccttctgtctgcaaccaccatc
ttcaccaccaacatctaccagaccatcaggagccaggcgtctgataaagagctgcagtgg
gtgatccgtctctccattgtggctgcaggacttgtgggaacgtccctcacctacctggac
agcagcatcatggtgttctggatcctgggcgcagatctgacctacaccatcatgctccca
cagctgatctgcgtcctcttcatccgggtttccaacggttacggggccgctgcaggctat
gttgttgcctttgtcatgagggttttgtgtggagagcccgtgttcaagcttcctgtcatc
ctcgctttcccaggatgcacttcagaggacggcgtttacgttcagcgcgctccgttcaag
accatctgcatgctgtctgctctgacctccattctggtgttttcatatgtggcctctctc
ctgtttaacaaggggatccttcatgagaggtgggacgtgttcaaggtgaaatcacaggaa
gaactacgaccagcagagggagccagagaggctgatggtgaaaagactgatgctccaaat
gaaaataaaccaatgctcgatacaggctgctaa
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