Anoplopoma fimbria (sablefish): 129111503
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Entry
129111503 CDS
T09102
Name
(RefSeq) LOW QUALITY PROTEIN: CLIP-associating protein 1-A-like
KO
K16578
CLIP-associating protein 1/2
Organism
afb
Anoplopoma fimbria (sablefish)
Brite
KEGG Orthology (KO) [BR:
afb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
afb03036
]
129111503
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
afb04812
]
129111503
Chromosome and associated proteins [BR:
afb03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
129111503
Cytoskeleton proteins [BR:
afb04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
129111503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
TOR1L1_N
Adaptin_N
Cnd1
Sec7-like_HUS
HEAT_DAAF5
Paxt-1_C
MMS19_N
MMS19_C
Hemerythrin
KH_DEAH11_1st
HEAT_ULK4
Motif
Other DBs
NCBI-GeneID:
129111503
NCBI-ProteinID:
XP_054479447
LinkDB
All DBs
Position
22:complement(1263153..1297215)
Genome browser
AA seq
1524 aa
AA seq
DB search
MEQEVSMEYLLEQVLQKDVGTRLQVGQEVTELILDPGRSPGMEEDQTLLDRTVDAVASSW
VNSSNFKVVLLGMDILSALVSRLQEKFRTQVGTVLPSLIDRLGDSKDQVRDQDQALLLKI
MDQAANPQFVWERMMGGFKHKNNRTREGLCLCLISTLNVFGSQSLTLSKIVPHICNLLGD
PTSQVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMVLSPVS
DKNFEDDDSGDGGRSSSSSKGKKAVSMGSFRRPPASASSAKSAGRDVAGAVDEEDFIQAF
EDVPTVQIYSNREVEEAMTKIRDVLSDDKKDWELRVAALKKVRSLLLAGAAEFDGFPQQL
RLTEAALKLSAKDLRSQVVREACLTLGHLSAVLGSRFDHAAEAIMPMLLNLVPNSAKIMA
TSGMSAIRLILRHTHYPRLIPIITSNCISKSVALRRRCFEFLELLLKDWQTSSLERHGTV
LMETIKKGVHDADAEARSVARRCYWCFHGHFRREAELLFQGLESSYQKALQAHLRSGDNT
MSLPASDRSSSSSQESLNRPLPVKNTFGSSSTRSKASHTRTPAASSPGSLQRSRSDVDVN
AAATATARTRMPAAPSALQSPSSPFGSASALPPGSYASLGRVRTRRTSSGNGPSVTDSRG
RSRGKVVSQSQPGSRSGSPGRLLSSGYGRIPRTNMGSSSAAAANTTSSVLSDKTRPXGHR
SHGCSRETSPSRSAADRLSHQARISASVNAMKILNTGTDVEAAVADALLLGDSRSKRRPP
RRRFESPGMYSDDDANSDASSACSERSYSSRNGGGGGGAPHYLRQTEDVAEVLNHCASAN
WSERKEGLLGLQNLLKSQRMLSRVELKRLCEIFTRMFADPHSKVRAPHEAGVCESELTEA
QTHSVCLCVAWPLAAVDSNKQRVFSMFLETLVDFVMLHREDLLDWLFVLLTQLLKKMGAD
LLGSVQAKVQKALDVTRESFPYEQQFNILMRFIVDQTQTPNLKVKVAILRYIEALARQMD
PADFVNSSETRLAVSRVITWTTEPKSSDVRKAAQVVLIALFELNTPEFTMLLGALPKTFQ
DGTTKLLHNHLRNASAISGISMASPSNSAGRTAPRPPSSRSSPLTSPTNCSHGGLSPSML
EFDSENLNSEEIYSSLRGVTEAIQNFSFRSQEDLGELLRRDGKRDGMSGVGASSDSDVVG
GGRTALDNKTSLLNTPSPRSFSGPRFRDYNPYNYTDAIGTLDKAALKEALYEDAVETLRD
GGRQESVENKMGNPKSFPAVPAEQLQLVGELLKELSGSQGGERGPEERRGTLLELLKVAR
EDSLVVWEEHFKTMLLLLLETLGDKDHTIRALALRVLKEILRNQPARFKNYAELTVMKTL
EAHKDSHKEVVRAAEEAASTLAASIHPEQCIKVLCPIVQTADYPINLAAIKMQTRAIERI
TKEPLHQLLTDIIPGLLQGYDNTESSVRKASVFCLVAVYSVIGEELKPYLAQLTGSKMKL
LNLYIKRAQTSTSNSSSSSDISSY
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggaggtgagcatggagtacctgctggagcaggtgctgcagaaggacgtgggc
acgaggctccaggtgggtcaggaggtcacggagctcatcctggacccggggaggtcaccc
ggcatggaggaggaccagaccctgctggacaggacggtggacgcagtggccagctcctgg
gtcaactccagcaacttcaaggtggttctgctggggatggacatcctgtccgctctggtc
agccggctgcaggagaagttcaggacgcaggtggggacagttctgccgagcctcatcgat
cggttaggagactccaaagaccaggtccgagaccaggaccaggcgctgctgctgaagatc
atggaccaggctgctaaccctcagtttgtgtgggagcgaatgatgggaggcttcaaacac
aagaacaacaggaccagagagggactctgcctctgtctcatctctacactaaacgtgttt
ggatctcagagtctgacgctcagtaaaatcgtccctcacatctgtaacctcctcggagat
cccaccagtcaggtgcgtgacggagccatgaactgcctggtggagatttaccgccacgtg
ggagagcgagtgaggatggatttgggaaagaagggtcttcctcagtcacggctcaacgtc
atcttcagtaagtttgacgaagttcagaggtcggggaacatggtcctctcacctgtgtca
gacaaaaactttgaggacgatgactccggggacggcggtcgctcctcgtcgtcgtccaaa
gggaagaaggcggtgagcatgggatccttccgacgcccccccgcctccgcctccagcgcc
aagtctgcagggagggatgttgctggagctgtggacgaggaggacttcatccaggccttt
gaggacgtccccaccgtgcagatctactccaacagggaggtggaggaggccatgaccaag
atcagagacgtgctgtctgacgataagaaggactgggagctcagagtggcggctctgaag
aaggtccgctcgctgctcctggccggcgccgcagagttcgacggcttcccgcagcagctg
cgcctgacggaggcggcgctcaaactgtcggccaaagacctccgctctcaggtggtgaga
gaggcctgcctcactctgggacacctgtcggcggtgctcggcagccggttcgaccacgcc
gcggaggccatcatgccgatgctcctcaacctggtccccaacagcgccaaaatcatggcc
acctccggcatgtcggccatccgcctcatcctgaggcacacacactacccgcgtctcatc
cccatcatcaccagcaactgtatctccaaatctgtggctctcaggaggcgctgcttcgag
ttcttggagctgctgctgaaggactggcagacgagctctctggagagacacggaaccgtt
ttaatggagaccataaagaaaggggtccacgacgccgacgccgaggctcgctctgtggcc
agaaggtgttactggtgtttccacggtcacttcaggcgggaggcggagcttctgttccag
ggcctggagtcgtcctatcagaaggctctgcaggctcacctgaggagcggagacaacacg
atgtcgctgccggcctccgaccgctcctcctcctcctcccaggagagcctcaatcgaccg
ctgccggtaaaaaacacctttggaagcagctcaacaagatccaaagcttcccacaccagg
actccggccgcctcctctcccggctccctccagcgctctcgcagcgacgtggacgtcaac
gcggccgccacggccaccgcccgaacccggatgcccgccgcgccctccgccctgcagtcg
ccctcttcgcccttcggctcggcctcggccctcccgcccggatcctacgcttcactgggt
cgagttcgaaccaggagaacgagttcaggaaacggtccgtcagtgacggacagccggggg
aggagtcgagggaaggtcgtgtcccagtctcaacccggcagcaggtccggttctcccggc
cgtctgctgagctccggctacggcagaatcccgaggacgaacatgggttcctcctccgcc
gccgccgccaacaccacgtccagcgtcctcagcgacaagacccgacccngaggtcaccgc
agccacggctgcagccgagagaccagcccctccagatcagccgccgaccgtctgtcccat
caggctcgcatctcggcctccgtcaacgccatgaagatcctcaacaccggcaccgacgtc
gaggccgccgtcgccgacgctctgctcttaggagactcgaggagtaagcggcggcccccg
aggcggcgcttcgagtccccggggatgtactcggacgacgacgccaacagcgacgcctcc
agcgcctgctccgagcgctcctacagctcacgcaacggaggcggaggcgggggggcgccg
cactacctgcgtcagacggaggacgtggccgaggtgctgaaccactgcgccagcgccaac
tggtccgagaggaaggaggggctgctgggactgcagaacctgctgaagagccagaggatg
ctcagtcgcgtggagctgaagaggctctgtgagatcttcaccaggatgtttgcagaccct
cacagcaaggtgagagctcctcatgaagcaggtgtttgtgagtcagaactaactgaagct
caaactcactctgtgtgtctctgtgttgcatggcccctcgctgctgtggactctaacaaa
cagagagtcttcagcatgttcctggagaccctggtggactttgtgatgctgcacagagaa
gacctgctggactggctcttcgtcctgctcacacagctgctgaagaagatgggggccgac
ctgctgggctccgtccaggccaaagtccagaaggccctggacgtcaccagagagtccttc
ccctacgagcagcagttcaacatcctgatgcgcttcatcgtggaccagacgcagaccccc
aacctgaaggtgaaggtggccatcctgcgctacatcgaggcgctcgcccgccagatggac
ccggccgacttcgtcaactccagcgagacgagactcgccgtgtcccgggtcatcacctgg
accaccgagcccaagagctccgacgtccgcaaggcggcccaggtggtgctgatcgccctg
tttgagctgaacaccccggagttcaccatgctgctgggcgctctgcccaaaaccttccag
gacgggaccaccaagctgctgcacaaccacctgaggaacgccagcgccatcagcggcatc
agcatggcgtctcccagtaactctgcgggtcggacggctccgcggccgcccagcagccgc
agcagcccgctgacctcccccaccaactgctcccatgggggcctttctcccagcatgctg
gagttcgacagtgagaacctgaactctgaggagatctacagctccctccgcggcgtcacc
gaggccatccagaacttcagcttccgcagccaagaggacctgggggagctgctgaggaga
gacgggaagagggacggcatgtctggcgtgggggcgtcctcggactctgacgtggtcggc
ggaggacgcacagccctggacaacaagacgtcgctgctcaacacgccgtcgccgcgctcc
ttctccgggccgcgcttcagagactacaacccgtacaactacacggacgccatcggcacg
ctggacaaggccgccctgaaggaggcgctgtacgaggacgccgtggagacgctgcgagac
ggaggccgacaagaaagtgtggagaacaagatggggaaccccaaaagcttcccagcggta
cccgccgagcagctgcagctggtgggggagctgctgaaggagctctccgggagccagggg
ggggagcggggccccgaggagcgccgggggaccctgctggagctgctgaaggtggcccgc
gaggacagcctggtggtgtgggaggagcacttcaagaccatgctgctgctgctgctggag
acgctgggagacaaagaccacaccatccgggccctggccctgagagtcctgaaggagatc
ctgaggaaccagccggcccgcttcaagaactacgccgagctcacggtcatgaagacgctg
gaggctcacaaagactctcacaaggaggtggtgcgtgcggcggaggaggcggcctccacg
ctggcggcctccatccacccggagcagtgcatcaaggtcctctgccccatcgtgcagacg
gccgactaccccatcaacctggccgccatcaagatgcagacgagggccatcgaacgcatc
accaaggagccgctgcaccagctgctgaccgacatcatacctggactcctgcagggctac
gacaacacggagagcagcgtgaggaaggccagcgtcttctgcctggtggccgtctactcg
gtgatcggggaggagctgaagccgtacctggctcagctgaccggcagcaagatgaagctg
ctgaacctctacatcaagagagctcagacctccaccagcaacagcagcagctcctccgac
atctcctcctactag
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integrated database retrieval system
