KEGG   Anoplopoma fimbria (sablefish): 129111518
Entry
129111518         CDS       T09102                                 
Name
(RefSeq) tubulin alpha-1A chain-like
  KO
K07374  tubulin alpha
Organism
afb  Anoplopoma fimbria (sablefish)
Pathway
afb04145  Phagosome
afb04210  Apoptosis
afb04530  Tight junction
afb04540  Gap junction
afb04814  Motor proteins
afb05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:afb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    129111518
  09143 Cell growth and death
   04210 Apoptosis
    129111518
  09144 Cellular community - eukaryotes
   04530 Tight junction
    129111518
   04540 Gap junction
    129111518
  09142 Cell motility
   04814 Motor proteins
    129111518
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    129111518
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:afb03019]
    129111518
   03036 Chromosome and associated proteins [BR:afb03036]
    129111518
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:afb04812]
    129111518
   04147 Exosome [BR:afb04147]
    129111518
Messenger RNA biogenesis [BR:afb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     129111518
Chromosome and associated proteins [BR:afb03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     129111518
Cytoskeleton proteins [BR:afb04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    129111518
Exosome [BR:afb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   129111518
  Exosomal proteins of other body fluids (saliva and urine)
   129111518
  Exosomal proteins of colorectal cancer cells
   129111518
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 129111518
NCBI-ProteinID: XP_054479464
LinkDB
Position
22:complement(1429709..1432761)
AA seq 451 aa
MRECLSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RTRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNSAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGTDSVGDEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcctctctatccatgtcggtcaggccggggttcaaatgggcaatgcatgc
tgggagctttactgcctggagcacggcatccagccggacggtcagatgcccagcgacaag
accatcggaggaggagacgactccttcaacaccttcttcagtgagactggagccggcaaa
catgttcccagagccgtctttgtggatctggagccaacagtcattgatgaggtccgtaca
ggaacctaccgccagctcttccaccccgagcagctgatcactggaaaggaggacgccgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcatcgacctggtgctggac
aggacacgcaaactggctgaccagtgcacagggctccagggtttcctcatcttccactcc
tttggaggaggaaccggctctggcttcacctccctgctgatggagcgtctctctgtcgac
tacggcaaaaagtcaaagcttgagtttgcagtttacccagccccccaggtgtccacagct
gtggtggagccttacaactccatcctgaccacccacaccaccctggagcactctgactgc
gccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggacatcgat
cgccccacctacaccaacctgaaccgtctgatcggacagatcgtctcctccatcaccgcc
tccctgcgctttgacggagccctgaatgtggacctgacggagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacctacgccccggttatctcagcagagaag
gcctatcacgagcagctcacagtcgctgagatcaccaacgcctgcttcgagcccgccaac
cagatggtgaagtgtgacccccgtcacggtaaatacatggcgtgctgcctcctgtaccgt
ggagacgtggtgcccaaagatgtcaactccgccatcgccaccatcaaaaccaagcgcacc
atccagtttgtggactggtgtcccaccggcttcaaggtgggcatcaactaccagcccccc
accgtggtgcctggaggagacctggccaaggtgcagcgggccgtgtgcatgctgagcaac
accaccgccatcgccgaggcctgggctcgactcgaccacaagttcgacctgatgtacgcc
aagagggccttcgtccactggtacgtgggggaggggatggaggagggggagttctcagag
gccagagaggacatggccgccctggagaaggattacgaggaggtgggcaccgacagcgtt
ggggacgaaggagaggaagagggcgaagaatattaa

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